PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spZS97 (oryza_sativa_spzs97)

Imported from atlas release summary for Oryza sativa.spZS97.

2627
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 769 19 BAHD (300) View species results
Alkaloid pathway 622 21 7DLGT (95) View species results
Phenylpropanoid pathway 490 11 POD (243) View species results
Flavonoid pathway 355 12 UFGT (201) View species results
Steroid pathway 206 13 SMT1/SMT2/SMT3 (85) View species results
Rosmarinic acid pathway 185 7 C4H (83) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2470 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 502 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
OsatZS9701G0000540.1 Alkaloid PMT low borderline
OsatZS9701G0000550.1 Alkaloid PMT medium pass
OsatZS9701G0007230.1 Alkaloid PMT medium pass
OsatZS9701G0007810.1 Alkaloid PMT medium pass
OsatZS9701G0017480.1 Alkaloid PMT medium pass
OsatZS9701G0023250.1 Alkaloid PMT medium pass
OsatZS9701G0039850.1 Alkaloid PMT medium pass
OsatZS9701G0039860.1 Alkaloid PMT medium pass
OsatZS9701G0066780.1 Alkaloid PMT low borderline
OsatZS9702G0013250.1 Alkaloid PMT medium pass
OsatZS9702G0013250.2 Alkaloid PMT medium pass
OsatZS9702G0013250.3 Alkaloid PMT medium pass
OsatZS9702G0015010.1 Alkaloid PMT medium borderline
OsatZS9702G0015010.2 Alkaloid PMT medium borderline
OsatZS9702G0015010.3 Alkaloid PMT medium borderline
OsatZS9703G0032450.1 Alkaloid PMT medium pass
OsatZS9703G0047950.1 Alkaloid PMT low borderline
OsatZS9704G0007480.1 Alkaloid PMT medium pass
OsatZS9704G0007760.1 Alkaloid PMT medium pass
OsatZS9704G0009840.1 Alkaloid PMT medium pass
OsatZS9705G0003170.1 Alkaloid PMT medium pass
OsatZS9705G0007280.1 Alkaloid PMT medium pass
OsatZS9705G0017720.1 Alkaloid PMT medium pass
OsatZS9706G0007260.1 Alkaloid PMT low borderline
OsatZS9706G0007280.1 Alkaloid PMT low borderline
OsatZS9706G0007300.1 Alkaloid PMT low borderline
OsatZS9706G0028330.1 Alkaloid PMT medium borderline
OsatZS9706G0028330.2 Alkaloid PMT medium borderline
OsatZS9706G0028330.3 Alkaloid PMT medium borderline
OsatZS9706G0028330.4 Alkaloid PMT medium borderline
OsatZS9706G0028330.5 Alkaloid PMT medium borderline
OsatZS9706G0028330.6 Alkaloid PMT medium borderline
OsatZS9706G0034960.1 Alkaloid PMT medium pass
OsatZS9706G0035030.1 Alkaloid PMT medium pass
OsatZS9706G0044540.1 Alkaloid PMT medium pass
OsatZS9706G0044540.2 Alkaloid PMT medium pass
OsatZS9706G0045610.1 Alkaloid PMT medium pass
OsatZS9707G0007270.1 Alkaloid PMT low borderline
OsatZS9708G0009560.1 Alkaloid PMT low borderline
OsatZS9708G0042510.1 Alkaloid PMT low borderline
OsatZS9708G0045200.1 Alkaloid PMT low borderline
OsatZS9708G0045200.2 Alkaloid PMT low borderline
OsatZS9708G0045200.3 Alkaloid PMT low borderline
OsatZS9708G0047090.1 Alkaloid PMT low borderline
OsatZS9709G0024320.1 Alkaloid PMT medium pass
OsatZS9710G0000830.1 Alkaloid PMT low borderline
OsatZS9710G0000860.1 Alkaloid PMT medium borderline
OsatZS9710G0000960.1 Alkaloid PMT medium pass
OsatZS9710G0001110.1 Alkaloid PMT medium pass
OsatZS9710G0002910.1 Alkaloid PMT medium pass