PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spZS97 (oryza_sativa_spzs97)

Imported from atlas release summary for Oryza sativa.spZS97.

2627
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 769 19 BAHD (300) View species results
Alkaloid pathway 622 21 7DLGT (95) View species results
Phenylpropanoid pathway 490 11 POD (243) View species results
Flavonoid pathway 355 12 UFGT (201) View species results
Steroid pathway 206 13 SMT1/SMT2/SMT3 (85) View species results
Rosmarinic acid pathway 185 7 C4H (83) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2470 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 502 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
OsatZS9703G0013140.1 Rosmarinic Acid C4H low borderline
OsatZS9703G0013140.2 Rosmarinic Acid C4H low borderline
OsatZS9703G0013160.1 Rosmarinic Acid C4H low borderline
OsatZS9703G0013160.2 Rosmarinic Acid C4H low borderline
OsatZS9703G0013290.1 Rosmarinic Acid C4H medium pass
OsatZS9703G0020600.1 Rosmarinic Acid C4H low borderline
OsatZS9703G0020600.2 Rosmarinic Acid C4H low borderline
OsatZS9703G0020600.3 Rosmarinic Acid C4H low borderline
OsatZS9703G0020600.4 Rosmarinic Acid C4H low borderline
OsatZS9703G0023900.1 Rosmarinic Acid C4H low borderline
OsatZS9703G0024250.2 Rosmarinic Acid C4H low borderline
OsatZS9703G0024250.3 Rosmarinic Acid C4H low borderline
OsatZS9703G0024250.4 Rosmarinic Acid C4H low borderline
OsatZS9703G0028990.1 Rosmarinic Acid C4H medium pass
OsatZS9703G0032170.1 Rosmarinic Acid C4H medium pass
OsatZS9703G0035280.1 Rosmarinic Acid C4H low borderline
OsatZS9703G0035290.1 Rosmarinic Acid C4H medium pass
OsatZS9703G0035740.1 Rosmarinic Acid C4H low borderline
OsatZS9703G0035740.2 Rosmarinic Acid C4H low borderline
OsatZS9703G0038180.1 Rosmarinic Acid C4H low borderline
OsatZS9703G0038310.1 Rosmarinic Acid C4H low borderline
OsatZS9703G0038380.1 Rosmarinic Acid C4H medium pass
OsatZS9703G0038490.1 Rosmarinic Acid C4H medium pass
OsatZS9703G0039480.1 Rosmarinic Acid C4H low borderline
OsatZS9703G0041950.1 Rosmarinic Acid C4H low borderline
OsatZS9703G0043920.1 Rosmarinic Acid C4H medium pass
OsatZS9703G0052110.1 Rosmarinic Acid C4H medium pass
OsatZS9703G0053640.1 Rosmarinic Acid C4H low borderline
OsatZS9703G0053650.1 Rosmarinic Acid C4H medium pass
OsatZS9703G0053680.1 Rosmarinic Acid C4H medium pass
OsatZS9703G0060210.1 Rosmarinic Acid C4H low borderline
OsatZS9703G0060210.2 Rosmarinic Acid C4H low borderline
OsatZS9703G0061300.1 Rosmarinic Acid C4H medium pass
OsatZS9704G0000170.1 Rosmarinic Acid C4H medium pass
OsatZS9704G0002570.1 Rosmarinic Acid C4H low borderline
OsatZS9704G0002590.1 Rosmarinic Acid C4H low borderline
OsatZS9704G0007430.1 Rosmarinic Acid C4H low borderline
OsatZS9704G0007430.2 Rosmarinic Acid C4H low borderline
OsatZS9704G0007570.1 Rosmarinic Acid C4H low borderline
OsatZS9704G0008120.1 Rosmarinic Acid C4H low borderline
OsatZS9704G0008320.1 Rosmarinic Acid C4H low borderline
OsatZS9704G0024900.1 Rosmarinic Acid C4H medium pass
OsatZS9704G0036450.1 Rosmarinic Acid C4H low borderline
OsatZS9704G0036450.2 Rosmarinic Acid C4H low borderline
OsatZS9704G0036450.3 Rosmarinic Acid C4H low borderline
OsatZS9704G0036450.4 Rosmarinic Acid C4H low borderline
OsatZS9704G0036450.5 Rosmarinic Acid C4H low borderline
OsatZS9704G0037290.1 Rosmarinic Acid C4H low borderline
OsatZS9704G0037300.1 Rosmarinic Acid C4H low borderline
OsatZS9704G0042600.1 Rosmarinic Acid C4H low borderline