PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spZS97 (oryza_sativa_spzs97)

Imported from atlas release summary for Oryza sativa.spZS97.

2627
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 769 19 BAHD (300) View species results
Alkaloid pathway 622 21 7DLGT (95) View species results
Phenylpropanoid pathway 490 11 POD (243) View species results
Flavonoid pathway 355 12 UFGT (201) View species results
Steroid pathway 206 13 SMT1/SMT2/SMT3 (85) View species results
Rosmarinic acid pathway 185 7 C4H (83) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2470 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 502 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
OsatZS9701G0007090.1 Flavonoid F3H medium borderline
OsatZS9701G0008070.1 Flavonoid F3H low borderline
OsatZS9701G0008070.2 Flavonoid F3H low borderline
OsatZS9701G0008070.3 Flavonoid F3H low borderline
OsatZS9701G0020970.1 Flavonoid F3H low borderline
OsatZS9701G0023450.1 Flavonoid F3H medium borderline
OsatZS9701G0023450.2 Flavonoid F3H medium borderline
OsatZS9701G0023510.1 Flavonoid F3H medium borderline
OsatZS9701G0025650.1 Flavonoid F3H medium borderline
OsatZS9701G0036490.1 Flavonoid F3H medium borderline
OsatZS9701G0036490.2 Flavonoid F3H medium borderline
OsatZS9701G0051060.1 Flavonoid F3H low borderline
OsatZS9701G0052370.1 Flavonoid F3H medium borderline
OsatZS9701G0058670.1 Flavonoid F3H medium borderline
OsatZS9701G0058670.2 Flavonoid F3H medium borderline
OsatZS9701G0058670.3 Flavonoid F3H medium borderline
OsatZS9701G0063240.1 Flavonoid F3H medium borderline
OsatZS9701G0064540.1 Flavonoid F3H low borderline
OsatZS9701G0067760.1 Flavonoid F3H medium borderline
OsatZS9701G0067760.2 Flavonoid F3H medium borderline
OsatZS9702G0017370.1 Flavonoid F3H medium borderline
OsatZS9702G0021820.1 Flavonoid F3H medium borderline
OsatZS9702G0021820.2 Flavonoid F3H medium borderline
OsatZS9702G0040330.1 Flavonoid F3H medium pass
OsatZS9702G0040330.2 Flavonoid F3H medium pass
OsatZS9702G0055830.1 Flavonoid F3H medium borderline
OsatZS9702G0055830.2 Flavonoid F3H medium borderline
OsatZS9702G0056260.1 Flavonoid F3H medium borderline
OsatZS9703G0001990.1 Flavonoid F3H medium borderline
OsatZS9703G0001990.2 Flavonoid F3H medium borderline
OsatZS9703G0001990.3 Flavonoid F3H medium borderline
OsatZS9703G0001990.4 Flavonoid F3H medium borderline
OsatZS9703G0001990.5 Flavonoid F3H medium borderline
OsatZS9703G0017220.1 Flavonoid F3H medium borderline
OsatZS9703G0030870.1 Flavonoid F3H medium borderline
OsatZS9703G0041760.1 Flavonoid F3H medium borderline
OsatZS9703G0047610.1 Flavonoid F3H medium borderline
OsatZS9703G0061960.1 Flavonoid F3H medium pass
OsatZS9703G0062200.1 Flavonoid F3H medium borderline
OsatZS9704G0008380.1 Flavonoid F3H medium borderline
OsatZS9704G0008460.1 Flavonoid F3H medium borderline
OsatZS9704G0031530.1 Flavonoid F3H low borderline
OsatZS9704G0036940.1 Flavonoid F3H medium pass
OsatZS9704G0036940.2 Flavonoid F3H medium pass
OsatZS9704G0040980.1 Flavonoid F3H medium borderline
OsatZS9704G0040980.2 Flavonoid F3H medium borderline
OsatZS9704G0046640.1 Flavonoid F3H medium pass
OsatZS9704G0046650.1 Flavonoid F3H medium borderline
OsatZS9704G0046660.1 Flavonoid F3H medium borderline
OsatZS9704G0052120.1 Flavonoid F3H medium borderline