PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spZS97 (oryza_sativa_spzs97)

Imported from atlas release summary for Oryza sativa.spZS97.

2627
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 769 19 BAHD (300) View species results
Alkaloid pathway 622 21 7DLGT (95) View species results
Phenylpropanoid pathway 490 11 POD (243) View species results
Flavonoid pathway 355 12 UFGT (201) View species results
Steroid pathway 206 13 SMT1/SMT2/SMT3 (85) View species results
Rosmarinic acid pathway 185 7 C4H (83) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2470 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 502 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
OsatZS9704G0053730.1 Flavonoid F3H medium borderline
OsatZS9704G0054180.1 Flavonoid F3H medium borderline
OsatZS9704G0054180.2 Flavonoid F3H medium borderline
OsatZS9704G0054180.3 Flavonoid F3H medium borderline
OsatZS9704G0054200.1 Flavonoid F3H medium borderline
OsatZS9704G0054210.2 Flavonoid F3H medium borderline
OsatZS9705G0002580.1 Flavonoid F3H medium borderline
OsatZS9705G0004270.1 Flavonoid F3H medium borderline
OsatZS9705G0004290.1 Flavonoid F3H medium borderline
OsatZS9705G0004290.2 Flavonoid F3H medium borderline
OsatZS9705G0005100.1 Flavonoid F3H medium pass
OsatZS9705G0007180.1 Flavonoid F3H medium borderline
OsatZS9705G0009950.1 Flavonoid F3H low borderline
OsatZS9705G0022160.1 Flavonoid F3H low borderline
OsatZS9705G0032670.1 Flavonoid F3H medium borderline
OsatZS9705G0032670.2 Flavonoid F3H medium pass
OsatZS9705G0040520.1 Flavonoid F3H medium borderline
OsatZS9705G0044560.1 Flavonoid F3H medium borderline
OsatZS9706G0006630.1 Flavonoid F3H low borderline
OsatZS9706G0006640.2 Flavonoid F3H medium borderline
OsatZS9706G0006640.3 Flavonoid F3H medium borderline
OsatZS9706G0006640.4 Flavonoid F3H medium borderline
OsatZS9706G0006640.5 Flavonoid F3H low borderline
OsatZS9706G0006650.1 Flavonoid F3H medium borderline
OsatZS9706G0006650.2 Flavonoid F3H medium borderline
OsatZS9706G0006650.3 Flavonoid F3H low borderline
OsatZS9706G0006660.1 Flavonoid F3H medium borderline
OsatZS9706G0013610.1 Flavonoid F3H medium borderline
OsatZS9706G0032410.1 Flavonoid F3H medium borderline
OsatZS9706G0037780.1 Flavonoid F3H medium borderline
OsatZS9707G0000240.1 Flavonoid F3H low borderline
OsatZS9707G0006500.1 Flavonoid F3H low borderline
OsatZS9707G0006510.1 Flavonoid F3H medium pass
OsatZS9708G0013780.2 Flavonoid F3H low borderline
OsatZS9708G0013780.3 Flavonoid F3H low borderline
OsatZS9708G0031530.1 Flavonoid F3H medium borderline
OsatZS9708G0031690.1 Flavonoid F3H medium borderline
OsatZS9708G0031720.1 Flavonoid F3H low borderline
OsatZS9708G0033980.1 Flavonoid F3H low borderline
OsatZS9708G0033980.2 Flavonoid F3H low borderline
OsatZS9708G0039700.5 Flavonoid F3H low borderline
OsatZS9708G0039700.6 Flavonoid F3H low borderline
OsatZS9708G0046570.1 Flavonoid F3H medium borderline
OsatZS9709G0006060.1 Flavonoid F3H low borderline
OsatZS9709G0006060.2 Flavonoid F3H low borderline
OsatZS9709G0006060.3 Flavonoid F3H low borderline
OsatZS9709G0006550.1 Flavonoid F3H low borderline
OsatZS9709G0017500.1 Flavonoid F3H medium borderline
OsatZS9709G0017570.1 Flavonoid F3H medium borderline
OsatZS9709G0017570.2 Flavonoid F3H medium borderline