PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spZS97 (oryza_sativa_spzs97)

Imported from atlas release summary for Oryza sativa.spZS97.

2627
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 769 19 BAHD (300) View species results
Alkaloid pathway 622 21 7DLGT (95) View species results
Phenylpropanoid pathway 490 11 POD (243) View species results
Flavonoid pathway 355 12 UFGT (201) View species results
Steroid pathway 206 13 SMT1/SMT2/SMT3 (85) View species results
Rosmarinic acid pathway 185 7 C4H (83) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2470 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 502 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
OsatZS9701G0051990.1 Alkaloid GS low borderline
OsatZS9702G0008540.1 Alkaloid GS high pass
OsatZS9702G0038110.1 Alkaloid GS low borderline
OsatZS9702G0059400.1 Alkaloid GS low borderline
OsatZS9702G0059400.2 Alkaloid GS low borderline
OsatZS9702G0059400.3 Alkaloid GS low borderline
OsatZS9703G0000160.5 Alkaloid GS low borderline
OsatZS9703G0000190.1 Alkaloid GS low borderline
OsatZS9703G0010820.1 Alkaloid GS high pass
OsatZS9704G0000720.1 Alkaloid GS low borderline
OsatZS9704G0013790.1 Alkaloid GS high pass
OsatZS9704G0026920.1 Alkaloid GS low borderline
OsatZS9704G0026920.2 Alkaloid GS low borderline
OsatZS9704G0026960.1 Alkaloid GS low borderline
OsatZS9704G0026960.2 Alkaloid GS low borderline
OsatZS9704G0026960.3 Alkaloid GS low borderline
OsatZS9704G0028600.1 Alkaloid GS low borderline
OsatZS9704G0028600.2 Alkaloid GS low borderline
OsatZS9704G0049350.1 Alkaloid GS high pass
OsatZS9705G0022000.1 Alkaloid GS low borderline
OsatZS9705G0022000.2 Alkaloid GS low borderline
OsatZS9705G0022000.3 Alkaloid GS low borderline
OsatZS9705G0022000.4 Alkaloid GS low borderline
OsatZS9706G0023510.1 Alkaloid GS medium pass
OsatZS9706G0023510.2 Alkaloid GS medium pass
OsatZS9708G0000780.1 Alkaloid GS medium pass
OsatZS9708G0000780.2 Alkaloid GS medium pass
OsatZS9708G0000780.3 Alkaloid GS medium pass
OsatZS9708G0015730.1 Alkaloid GS high pass
OsatZS9708G0030320.1 Alkaloid GS low borderline
OsatZS9708G0030320.2 Alkaloid GS low borderline
OsatZS9708G0030320.3 Alkaloid GS low borderline
OsatZS9708G0045330.1 Alkaloid GS medium pass
OsatZS9708G0045330.2 Alkaloid GS medium pass
OsatZS9708G0045330.3 Alkaloid GS medium pass
OsatZS9709G0022460.1 Alkaloid GS high pass
OsatZS9709G0022480.1 Alkaloid GS high pass
OsatZS9709G0022490.1 Alkaloid GS high pass
OsatZS9709G0022500.1 Alkaloid GS high pass
OsatZS9709G0031510.1 Alkaloid GS low borderline
OsatZS9709G0031540.1 Alkaloid GS low borderline
OsatZS9709G0031550.1 Alkaloid GS low borderline
OsatZS9709G0031550.2 Alkaloid GS low borderline
OsatZS9709G0031550.3 Alkaloid GS low borderline
OsatZS9710G0011730.1 Alkaloid GS high pass
OsatZS9710G0011730.2 Alkaloid GS high pass
OsatZS9710G0011730.3 Alkaloid GS high pass
OsatZS9710G0011730.4 Alkaloid GS high pass
OsatZS9710G0011730.5 Alkaloid GS high pass
OsatZS9710G0011730.6 Alkaloid GS high pass