PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spZS97 (oryza_sativa_spzs97)

Imported from atlas release summary for Oryza sativa.spZS97.

2627
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 769 19 BAHD (300) View species results
Alkaloid pathway 622 21 7DLGT (95) View species results
Phenylpropanoid pathway 490 11 POD (243) View species results
Flavonoid pathway 355 12 UFGT (201) View species results
Steroid pathway 206 13 SMT1/SMT2/SMT3 (85) View species results
Rosmarinic acid pathway 185 7 C4H (83) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2470 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 502 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
OsatZS9701G0000700.1 Flavonoid IFR high pass
OsatZS9701G0000720.1 Flavonoid IFR high pass
OsatZS9701G0012350.1 Flavonoid IFR low borderline
OsatZS9701G0012350.2 Flavonoid IFR low borderline
OsatZS9701G0012350.3 Flavonoid IFR low borderline
OsatZS9701G0012370.1 Flavonoid IFR high pass
OsatZS9701G0019420.1 Flavonoid IFR low borderline
OsatZS9701G0059040.1 Flavonoid IFR low borderline
OsatZS9701G0059040.2 Flavonoid IFR low borderline
OsatZS9702G0013050.1 Flavonoid IFR low borderline
OsatZS9702G0013050.2 Flavonoid IFR low borderline
OsatZS9702G0013050.3 Flavonoid IFR low borderline
OsatZS9702G0013050.4 Flavonoid IFR low borderline
OsatZS9702G0013050.5 Flavonoid IFR low borderline
OsatZS9702G0037270.1 Flavonoid IFR low borderline
OsatZS9702G0050210.1 Flavonoid IFR high pass
OsatZS9702G0060210.1 Flavonoid IFR low borderline
OsatZS9702G0061020.1 Flavonoid IFR low borderline
OsatZS9703G0007300.1 Flavonoid IFR medium borderline
OsatZS9703G0014370.1 Flavonoid IFR high pass
OsatZS9703G0016210.1 Flavonoid IFR low borderline
OsatZS9703G0016210.2 Flavonoid IFR low borderline
OsatZS9703G0016210.3 Flavonoid IFR low borderline
OsatZS9703G0016500.1 Flavonoid IFR low borderline
OsatZS9703G0022050.1 Flavonoid IFR medium pass
OsatZS9703G0022700.1 Flavonoid IFR low borderline
OsatZS9703G0022700.2 Flavonoid IFR low borderline
OsatZS9703G0059140.1 Flavonoid IFR low borderline
OsatZS9704G0026440.1 Flavonoid IFR low borderline
OsatZS9704G0026440.2 Flavonoid IFR low borderline
OsatZS9704G0026440.3 Flavonoid IFR low borderline
OsatZS9704G0026500.1 Flavonoid IFR low borderline
OsatZS9704G0026500.2 Flavonoid IFR low borderline
OsatZS9704G0031140.1 Flavonoid IFR low borderline
OsatZS9705G0016770.1 Flavonoid IFR medium pass
OsatZS9705G0027190.1 Flavonoid IFR low borderline
OsatZS9705G0034130.1 Flavonoid IFR low borderline
OsatZS9706G0022240.1 Flavonoid IFR high pass
OsatZS9706G0022240.2 Flavonoid IFR high pass
OsatZS9706G0022320.1 Flavonoid IFR high pass
OsatZS9706G0022320.2 Flavonoid IFR high pass
OsatZS9706G0022320.3 Flavonoid IFR high pass
OsatZS9706G0022320.4 Flavonoid IFR high pass
OsatZS9706G0023220.1 Flavonoid IFR low borderline
OsatZS9706G0023230.1 Flavonoid IFR low borderline
OsatZS9706G0045140.1 Flavonoid IFR low borderline
OsatZS9707G0010480.1 Flavonoid IFR low borderline
OsatZS9707G0047610.1 Flavonoid IFR low borderline
OsatZS9707G0047610.2 Flavonoid IFR low borderline
OsatZS9708G0046060.1 Flavonoid IFR medium pass