Oryza sativa.spZS97 (oryza_sativa_spzs97)
Imported from atlas release summary for Oryza sativa.spZS97.
2627
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2627
Candidate Genes
BAHD
6.13%
C4H
5.82%
C3'H/CYP98A
5.42%
4CL
3.96%
POD
3.96%
UGT
3.65%
7DLGT
3.4%
UFGT
3.34%
Other Families
64.33%
More Families (97)
IFS
221
3.28%
T3O
219
3.25%
CYP76
198
2.94%
NMT
192
2.85%
F3'H/CYP75B
154
2.28%
DWF4/CYP90B1
153
2.27%
STR
127
1.88%
CAD
123
1.82%
SMT1/SMT2/SMT3
122
1.81%
BR6OX2/CYP85A2
120
1.78%
CAS
120
1.78%
F3H
117
1.74%
TPS
117
1.74%
CYP71
107
1.59%
GES
97
1.44%
SGD
79
1.17%
TRI/TRII
69
1.02%
G8O/G8H
64
0.95%
IFR
64
0.95%
CODM/T6ODM
62
0.92%
FNS
62
0.92%
CCR
61
0.91%
CYP90D1
61
0.91%
ANR
60
0.89%
GS
57
0.85%
CSE
57
0.85%
SLS
56
0.83%
H6H
56
0.83%
COMT
54
0.8%
PYKS
53
0.79%
PMT
52
0.77%
T16H
52
0.77%
BR6OX1/CYP85A1
51
0.76%
LAC
49
0.73%
F5H/CYP84A
48
0.71%
HCT
45
0.67%
RAS
44
0.65%
NCS
42
0.62%
16OMT
42
0.62%
IO
36
0.53%
DFR
36
0.53%
F3'5'H/CYP75A
36
0.53%
CPD/CYP90A1
35
0.52%
CHS
34
0.5%
COR
32
0.47%
CYP51G1
32
0.47%
LAMT
29
0.43%
PAL
27
0.4%
BBE
26
0.39%
8HGO
25
0.37%
FPPS
24
0.36%
TAT
23
0.34%
CNMT
22
0.33%
7DLH
22
0.33%
ANS/LDOX
22
0.33%
ROT3/CYP90C1
20
0.3%
MVK
17
0.25%
SQS/FDFT1
16
0.24%
CYP719
15
0.22%
CPR
15
0.22%
AACT
15
0.22%
MCT/IspD
14
0.21%
MPO
13
0.19%
XMT_MXMT_DXMT
13
0.19%
CHI
13
0.19%
GGPPS
13
0.19%
SQE
10
0.15%
HMGR
10
0.15%
TYDC_DDC
9
0.13%
TDC
9
0.13%
CCoAOMT
9
0.13%
SMO1/SMO2
9
0.13%
CYP80B1
8
0.12%
ADC
8
0.12%
DXR
8
0.12%
FLS
7
0.1%
HPPR
7
0.1%
HMGS
7
0.1%
DXS
7
0.1%
DWF5
6
0.09%
MVD
6
0.09%
HDS/IspG
6
0.09%
HDR/IspH
6
0.09%
CYP80F1
5
0.07%
DWF7
5
0.07%
FK
5
0.07%
DWF1
5
0.07%
PMK
5
0.07%
ODC
4
0.06%
6OMT_4OMT_SOMT
4
0.06%
MDS/IspF
4
0.06%
ISY
3
0.04%
DET2
3
0.04%
GPPS
3
0.04%
HYD1
2
0.03%
CPI1
2
0.03%
IDI
2
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 769 | 19 | BAHD (300) | View species results |
| Alkaloid pathway | 622 | 21 | 7DLGT (95) | View species results |
| Phenylpropanoid pathway | 490 | 11 | POD (243) | View species results |
| Flavonoid pathway | 355 | 12 | UFGT (201) | View species results |
| Steroid pathway | 206 | 13 | SMT1/SMT2/SMT3 (85) | View species results |
| Rosmarinic acid pathway | 185 | 7 | C4H (83) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2470 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 502 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| OsatZS9706G0047090.4 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9706G0047090.5 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9706G0047090.6 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9707G0008520.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9707G0008520.3 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9707G0019940.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9707G0019940.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9707G0019940.3 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9707G0019940.4 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9707G0019940.5 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9707G0034500.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9707G0036350.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| OsatZS9707G0036370.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| OsatZS9707G0036380.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| OsatZS9708G0006380.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9708G0007190.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| OsatZS9708G0007210.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| OsatZS9708G0030980.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9708G0036270.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| OsatZS9708G0045260.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9708G0045260.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9709G0003850.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9709G0003850.3 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9709G0006770.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9709G0015320.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9709G0015320.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9709G0015350.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9709G0015380.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9709G0015380.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9709G0019410.1 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| OsatZS9709G0019430.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| OsatZS9709G0022590.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9709G0029160.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9709G0029170.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9709G0031220.1 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| OsatZS9710G0008330.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9710G0013240.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9710G0013240.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9710G0013240.3 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9710G0013240.4 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9710G0028550.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9710G0033370.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9710G0037530.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| OsatZS9710G0037530.2 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| OsatZS9711G0000040.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9711G0000040.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9711G0003570.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| OsatZS9711G0003580.1 | Alkaloid | STR | medium | pass | STR__00002__sp_P68175_STSY_RAUSE |
| OsatZS9711G0006480.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| OsatZS9711G0019380.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |