PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spZS97 (oryza_sativa_spzs97)

Imported from atlas release summary for Oryza sativa.spZS97.

2627
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 769 19 BAHD (300) View species results
Alkaloid pathway 622 21 7DLGT (95) View species results
Phenylpropanoid pathway 490 11 POD (243) View species results
Flavonoid pathway 355 12 UFGT (201) View species results
Steroid pathway 206 13 SMT1/SMT2/SMT3 (85) View species results
Rosmarinic acid pathway 185 7 C4H (83) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2470 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 502 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
OsatZS9702G0060310.1 Alkaloid T3O medium pass
OsatZS9702G0060310.2 Alkaloid T3O medium pass
OsatZS9702G0060310.3 Alkaloid T3O medium pass
OsatZS9703G0001100.1 Alkaloid T3O medium borderline
OsatZS9703G0003500.1 Alkaloid T3O medium pass
OsatZS9703G0003600.1 Alkaloid T3O medium pass
OsatZS9703G0003620.1 Alkaloid T3O low borderline
OsatZS9703G0003630.1 Alkaloid T3O low borderline
OsatZS9703G0003630.2 Alkaloid T3O low borderline
OsatZS9703G0003640.1 Alkaloid T3O medium pass
OsatZS9703G0003640.2 Alkaloid T3O medium pass
OsatZS9703G0005910.1 Alkaloid T3O low borderline
OsatZS9703G0010810.1 Alkaloid T3O low borderline
OsatZS9703G0011180.1 Alkaloid T3O medium pass
OsatZS9703G0011180.2 Alkaloid T3O medium pass
OsatZS9703G0011180.3 Alkaloid T3O medium pass
OsatZS9703G0013140.1 Alkaloid T3O medium borderline
OsatZS9703G0013140.2 Alkaloid T3O medium borderline
OsatZS9703G0013160.1 Alkaloid T3O medium borderline
OsatZS9703G0013160.2 Alkaloid T3O medium borderline
OsatZS9703G0020600.1 Alkaloid T3O medium pass
OsatZS9703G0020600.2 Alkaloid T3O medium pass
OsatZS9703G0020600.3 Alkaloid T3O medium pass
OsatZS9703G0020600.4 Alkaloid T3O medium pass
OsatZS9703G0032170.1 Alkaloid T3O medium borderline
OsatZS9703G0035290.1 Alkaloid T3O medium borderline
OsatZS9703G0038310.1 Alkaloid T3O medium borderline
OsatZS9703G0038380.1 Alkaloid T3O medium borderline
OsatZS9703G0038490.1 Alkaloid T3O medium borderline
OsatZS9703G0039440.1 Alkaloid T3O medium pass
OsatZS9703G0039440.2 Alkaloid T3O medium pass
OsatZS9703G0039440.3 Alkaloid T3O medium pass
OsatZS9703G0039440.5 Alkaloid T3O medium pass
OsatZS9703G0041950.1 Alkaloid T3O low borderline
OsatZS9703G0043920.1 Alkaloid T3O medium borderline
OsatZS9703G0044730.1 Alkaloid T3O medium pass
OsatZS9703G0044730.2 Alkaloid T3O medium pass
OsatZS9703G0044730.3 Alkaloid T3O low borderline
OsatZS9703G0052110.1 Alkaloid T3O medium borderline
OsatZS9703G0053650.1 Alkaloid T3O medium borderline
OsatZS9703G0054230.1 Alkaloid T3O low borderline
OsatZS9703G0060210.1 Alkaloid T3O medium pass
OsatZS9703G0060210.2 Alkaloid T3O medium pass
OsatZS9703G0060210.3 Alkaloid T3O medium pass
OsatZS9703G0061300.1 Alkaloid T3O medium borderline
OsatZS9704G0000170.1 Alkaloid T3O medium borderline
OsatZS9704G0008120.1 Alkaloid T3O medium borderline
OsatZS9704G0008320.1 Alkaloid T3O medium borderline
OsatZS9704G0024900.1 Alkaloid T3O medium borderline
OsatZS9704G0037290.1 Alkaloid T3O medium borderline