PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spZS97 (oryza_sativa_spzs97)

Imported from atlas release summary for Oryza sativa.spZS97.

2627
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 769 19 BAHD (300) View species results
Alkaloid pathway 622 21 7DLGT (95) View species results
Phenylpropanoid pathway 490 11 POD (243) View species results
Flavonoid pathway 355 12 UFGT (201) View species results
Steroid pathway 206 13 SMT1/SMT2/SMT3 (85) View species results
Rosmarinic acid pathway 185 7 C4H (83) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2470 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 502 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
OsatZS9704G0044400.1 Alkaloid T3O low borderline
OsatZS9704G0045330.1 Alkaloid T3O medium pass
OsatZS9704G0045330.3 Alkaloid T3O medium pass
OsatZS9705G0007520.1 Alkaloid T3O medium pass
OsatZS9705G0009230.1 Alkaloid T3O medium pass
OsatZS9705G0010140.1 Alkaloid T3O medium pass
OsatZS9705G0029360.1 Alkaloid T3O medium pass
OsatZS9705G0032930.1 Alkaloid T3O medium borderline
OsatZS9705G0034580.1 Alkaloid T3O low borderline
OsatZS9705G0038530.1 Alkaloid T3O medium borderline
OsatZS9706G0000120.1 Alkaloid T3O medium borderline
OsatZS9706G0000860.1 Alkaloid T3O medium pass
OsatZS9706G0000860.2 Alkaloid T3O medium pass
OsatZS9706G0000860.3 Alkaloid T3O medium pass
OsatZS9706G0000860.4 Alkaloid T3O medium pass
OsatZS9706G0020210.1 Alkaloid T3O medium borderline
OsatZS9706G0021010.1 Alkaloid T3O medium borderline
OsatZS9706G0021180.1 Alkaloid T3O medium borderline
OsatZS9706G0021180.2 Alkaloid T3O medium borderline
OsatZS9706G0021180.3 Alkaloid T3O medium borderline
OsatZS9706G0023870.1 Alkaloid T3O medium borderline
OsatZS9706G0025200.1 Alkaloid T3O medium borderline
OsatZS9706G0031720.1 Alkaloid T3O medium pass
OsatZS9706G0031720.2 Alkaloid T3O medium pass
OsatZS9706G0031720.3 Alkaloid T3O low borderline
OsatZS9706G0031720.4 Alkaloid T3O medium pass
OsatZS9706G0035280.1 Alkaloid T3O medium borderline
OsatZS9706G0036610.1 Alkaloid T3O medium borderline
OsatZS9706G0039070.1 Alkaloid T3O medium borderline
OsatZS9706G0039070.2 Alkaloid T3O medium borderline
OsatZS9706G0039090.1 Alkaloid T3O medium borderline
OsatZS9706G0039090.2 Alkaloid T3O medium borderline
OsatZS9706G0039090.3 Alkaloid T3O medium borderline
OsatZS9706G0039120.1 Alkaloid T3O medium borderline
OsatZS9706G0041940.1 Alkaloid T3O medium borderline
OsatZS9706G0042700.1 Alkaloid T3O medium pass
OsatZS9707G0020080.1 Alkaloid T3O medium borderline
OsatZS9707G0020140.1 Alkaloid T3O medium borderline
OsatZS9707G0028380.1 Alkaloid T3O medium pass
OsatZS9707G0034120.1 Alkaloid T3O medium pass
OsatZS9707G0034130.1 Alkaloid T3O medium pass
OsatZS9707G0034130.10 Alkaloid T3O medium pass
OsatZS9707G0034130.11 Alkaloid T3O medium pass
OsatZS9707G0034130.2 Alkaloid T3O medium pass
OsatZS9707G0034130.3 Alkaloid T3O low borderline
OsatZS9707G0034130.4 Alkaloid T3O low borderline
OsatZS9707G0034130.5 Alkaloid T3O low borderline
OsatZS9707G0034130.6 Alkaloid T3O low borderline
OsatZS9707G0034130.7 Alkaloid T3O medium pass
OsatZS9707G0034130.8 Alkaloid T3O medium pass