PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spZS97 (oryza_sativa_spzs97)

Imported from atlas release summary for Oryza sativa.spZS97.

3350
Candidate Protein Records
2627
Pathway-Level Records
6740
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 769 19 BAHD (300) View species results
Alkaloid pathway 622 21 7DLGT (95) View species results
Phenylpropanoid pathway 490 11 POD (243) View species results
Flavonoid pathway 355 12 UFGT (201) View species results
Steroid pathway 206 13 SMT1/SMT2/SMT3 (85) View species results
Rosmarinic acid pathway 185 7 C4H (83) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2470 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 502 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
OsatZS9709G0005040.1 Alkaloid NMT medium pass
OsatZS9709G0005040.2 Alkaloid NMT medium pass
OsatZS9709G0005040.3 Alkaloid NMT medium pass
OsatZS9709G0005040.4 Alkaloid NMT medium pass
OsatZS9709G0005040.5 Alkaloid NMT medium pass
OsatZS9709G0013240.1 Alkaloid NMT medium pass
OsatZS9709G0013240.2 Alkaloid NMT medium pass
OsatZS9709G0018070.1 Alkaloid NMT medium pass
OsatZS9709G0018070.2 Alkaloid NMT medium pass
OsatZS9709G0018070.3 Alkaloid NMT medium pass
OsatZS9709G0018390.1 Alkaloid NMT low borderline
OsatZS9709G0021510.1 Alkaloid NMT low borderline
OsatZS9709G0022930.1 Alkaloid NMT low borderline
OsatZS9709G0023200.1 Alkaloid NMT medium pass
OsatZS9709G0023200.2 Alkaloid NMT medium pass
OsatZS9709G0036040.1 Alkaloid NMT low borderline
OsatZS9709G0036040.2 Alkaloid NMT low borderline
OsatZS9709G0036040.5 Alkaloid NMT low borderline
OsatZS9709G0036040.6 Alkaloid NMT low borderline
OsatZS9709G0036040.7 Alkaloid NMT low borderline
OsatZS9710G0032860.1 Alkaloid NMT medium borderline
OsatZS9710G0032860.2 Alkaloid NMT medium borderline
OsatZS9710G0032860.4 Alkaloid NMT medium borderline
OsatZS9711G0002810.1 Alkaloid NMT medium pass
OsatZS9711G0036780.1 Alkaloid NMT medium pass
OsatZS9711G0036780.2 Alkaloid NMT medium pass
OsatZS9711G0036780.3 Alkaloid NMT medium pass
OsatZS9711G0036780.4 Alkaloid NMT medium pass
OsatZS9711G0036780.5 Alkaloid NMT medium pass
OsatZS9712G0002590.1 Alkaloid NMT medium pass
OsatZS9712G0008560.1 Alkaloid NMT medium pass
OsatZS9712G0008560.2 Alkaloid NMT medium borderline
OsatZS9712G0008560.3 Alkaloid NMT medium borderline
OsatZS9712G0011600.1 Alkaloid NMT medium borderline
OsatZS9712G0037830.1 Alkaloid NMT low borderline
OsatZS9712G0037830.2 Alkaloid NMT low borderline
OsatZS9712G0037830.3 Alkaloid NMT low borderline
OsatZS9712G0037830.4 Alkaloid NMT low borderline
OsatZS9712G0037830.5 Alkaloid NMT low borderline
OsatZS9702G0029680.1 Alkaloid ODC medium pass
OsatZS9704G0003260.1 Alkaloid ODC medium pass
OsatZS9708G0014090.1 Alkaloid ODC low borderline
OsatZS9709G0034800.1 Alkaloid ODC medium pass
OsatZS9701G0000540.1 Alkaloid PMT low borderline
OsatZS9701G0000550.1 Alkaloid PMT medium pass
OsatZS9701G0007230.1 Alkaloid PMT medium pass
OsatZS9701G0007810.1 Alkaloid PMT medium pass
OsatZS9701G0017480.1 Alkaloid PMT medium pass
OsatZS9701G0023250.1 Alkaloid PMT medium pass
OsatZS9701G0039850.1 Alkaloid PMT medium pass