PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spZS97 (oryza_sativa_spzs97)

Imported from atlas release summary for Oryza sativa.spZS97.

2627
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 769 19 BAHD (300) View species results
Alkaloid pathway 622 21 7DLGT (95) View species results
Phenylpropanoid pathway 490 11 POD (243) View species results
Flavonoid pathway 355 12 UFGT (201) View species results
Steroid pathway 206 13 SMT1/SMT2/SMT3 (85) View species results
Rosmarinic acid pathway 185 7 C4H (83) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2470 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 502 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
OsatZS9701G0052370.2 Flavonoid ANS/LDOX medium borderline
OsatZS9702G0043840.1 Flavonoid ANS/LDOX medium borderline
OsatZS9702G0043840.2 Flavonoid ANS/LDOX medium borderline
OsatZS9703G0041510.14 Flavonoid ANS/LDOX low borderline
OsatZS9703G0061890.1 Flavonoid ANS/LDOX low borderline
OsatZS9705G0004280.1 Flavonoid ANS/LDOX medium borderline
OsatZS9706G0005430.1 Flavonoid ANS/LDOX medium borderline
OsatZS9706G0006640.1 Flavonoid ANS/LDOX medium borderline
OsatZS9710G0013540.1 Flavonoid ANS/LDOX low borderline
OsatZS9710G0013540.2 Flavonoid ANS/LDOX low borderline
OsatZS9710G0013540.3 Flavonoid ANS/LDOX low borderline
OsatZS9710G0013540.4 Flavonoid ANS/LDOX low borderline
OsatZS9710G0038820.1 Flavonoid ANS/LDOX medium borderline
OsatZS9710G0038820.2 Flavonoid ANS/LDOX medium borderline
OsatZS9710G0038820.3 Flavonoid ANS/LDOX medium borderline
OsatZS9710G0038840.1 Flavonoid ANS/LDOX medium borderline
OsatZS9710G0038900.1 Flavonoid ANS/LDOX medium borderline
OsatZS9710G0038900.2 Flavonoid ANS/LDOX medium borderline
OsatZS9710G0038900.3 Flavonoid ANS/LDOX medium borderline
OsatZS9710G0038900.4 Flavonoid ANS/LDOX medium borderline
OsatZS9711G0007380.1 Flavonoid ANS/LDOX medium borderline
OsatZS9701G0047220.1 Flavonoid C4H medium borderline
OsatZS9701G0057420.1 Flavonoid C4H medium pass
OsatZS9705G0022960.1 Flavonoid C4H medium borderline
OsatZS9706G0032110.1 Flavonoid C4H medium borderline
OsatZS9706G0032110.3 Flavonoid C4H medium borderline
OsatZS9707G0045680.1 Flavonoid C4H medium borderline
OsatZS9708G0025680.1 Flavonoid C4H low borderline
OsatZS9703G0058880.1 Flavonoid CHI medium pass
OsatZS9703G0058880.2 Flavonoid CHI medium pass
OsatZS9706G0008670.1 Flavonoid CHI low borderline
OsatZS9711G0001640.1 Flavonoid CHI medium pass
OsatZS9711G0001640.2 Flavonoid CHI medium pass
OsatZS9712G0001450.1 Flavonoid CHI medium pass
OsatZS9712G0001450.2 Flavonoid CHI medium pass
OsatZS9712G0001450.3 Flavonoid CHI medium pass
OsatZS9712G0001450.4 Flavonoid CHI medium pass
OsatZS9712G0001450.5 Flavonoid CHI medium pass
OsatZS9712G0001450.6 Flavonoid CHI medium pass
OsatZS9712G0001450.7 Flavonoid CHI medium pass
OsatZS9712G0027710.1 Flavonoid CHI medium pass
OsatZS9701G0023290.1 Flavonoid CHS low borderline
OsatZS9701G0038540.1 Flavonoid CHS medium pass
OsatZS9701G0038540.2 Flavonoid CHS medium pass
OsatZS9703G0046000.1 Flavonoid CHS medium pass
OsatZS9704G0000470.1 Flavonoid CHS medium pass
OsatZS9704G0000470.2 Flavonoid CHS medium pass
OsatZS9704G0020750.1 Flavonoid CHS low borderline
OsatZS9704G0022190.1 Flavonoid CHS medium pass
OsatZS9705G0010240.1 Flavonoid CHS medium pass