PlantSME Plant secondary metabolism enzyme database

Pallavicinia ambigua (pallavicinia_ambigua)

Imported from atlas release summary for Pallavicinia ambigua.

762
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 220 13 POD (85) View species results
Terpenoid pathway 195 20 BAHD (69) View species results
Alkaloid pathway 142 21 STR (23) View species results
Flavonoid pathway 81 11 CHS (18) View species results
Rosmarinic acid pathway 81 7 C4H (33) View species results
Steroid pathway 43 13 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 926 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 170 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
Reset
Gene Pathway Family Confidence Status
Pambctg000230_pilon_pilon_pilon0000260 Alkaloid IO medium borderline
Pambctg000790_pilon_pilon_pilon0007450 Alkaloid IO medium borderline
Pambctg000790_pilon_pilon_pilon0007480 Alkaloid IO medium borderline
Pambctg000790_pilon_pilon_pilon0007560 Alkaloid IO medium borderline
Pambctg000790_pilon_pilon_pilon0007570 Alkaloid IO medium borderline
Pambctg001110_pilon_pilon_pilon0012300 Alkaloid IO medium borderline
Pambctg001110_pilon_pilon_pilon0012340 Alkaloid IO medium borderline
Pambctg001160_pilon_pilon_pilon0015010 Alkaloid IO medium borderline
Pambctg001190_pilon_pilon_pilon0016540 Alkaloid IO medium borderline
Pambctg002050_pilon_pilon_pilon0035120 Alkaloid IO medium borderline
Pambctg003090_pilon_pilon_pilon0044780 Alkaloid IO low borderline
Pambctg003530_pilon_pilon_pilon0054090 Alkaloid IO medium borderline
Pambctg003530_pilon_pilon_pilon0054120 Alkaloid IO medium borderline
Pambctg004160_pilon_pilon_pilon0063590 Alkaloid IO medium borderline
Pambctg006580_pilon_pilon_pilon0095090 Alkaloid IO medium borderline
Pambctg006580_pilon_pilon_pilon0095100 Alkaloid IO medium borderline
Pambctg007400_pilon_pilon_pilon0106720 Alkaloid IO medium borderline
Pambctg007510_pilon_pilon_pilon0111880 Alkaloid IO medium borderline
Pambctg007510_pilon_pilon_pilon0111890 Alkaloid IO medium borderline
Pambctg008790_pilon_pilon_pilon0120730 Alkaloid IO medium borderline
Pambctg008790_pilon_pilon_pilon0120740 Alkaloid IO medium borderline
Pambctg010740_pilon_pilon_pilon0163970 Alkaloid IO low borderline
Pambctg011450_pilon_pilon_pilon0174200 Alkaloid IO low borderline
Pambctg011840_pilon_pilon_pilon0179940 Alkaloid IO medium borderline
Pambctg011990_pilon_pilon_pilon0181870 Alkaloid IO medium borderline
Pambctg012880_pilon_pilon_pilon0195830 Alkaloid IO medium borderline
Pambctg012920_pilon_pilon_pilon0196760 Alkaloid IO medium borderline
Pambctg012940_pilon_pilon_pilon0197070 Alkaloid IO medium pass
Pambctg013180_pilon_pilon_pilon0200210 Alkaloid IO medium borderline
Pambctg013220_pilon_pilon_pilon0200700 Alkaloid IO medium borderline
Pambctg014150_pilon_pilon_pilon0225640 Alkaloid IO medium pass
Pambctg014340_pilon_pilon_pilon0227830 Alkaloid IO medium borderline
Pambctg015010_pilon_pilon_pilon0236490 Alkaloid IO medium borderline
Pambctg015090_pilon_pilon_pilon0238130 Alkaloid IO medium borderline
Pambctg015370_pilon_pilon_pilon0245780 Alkaloid IO medium borderline
Pambctg015700_pilon_pilon_pilon0254730 Alkaloid IO medium borderline
Pambctg016040_pilon_pilon_pilon0269910 Alkaloid IO medium borderline