PlantSME Plant secondary metabolism enzyme database

Pallavicinia ambigua (pallavicinia_ambigua)

Imported from atlas release summary for Pallavicinia ambigua.

762
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 220 13 POD (85) View species results
Terpenoid pathway 195 20 BAHD (69) View species results
Alkaloid pathway 142 21 STR (23) View species results
Flavonoid pathway 81 11 CHS (18) View species results
Rosmarinic acid pathway 81 7 C4H (33) View species results
Steroid pathway 43 13 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 926 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 170 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Pambctg014050_pilon_pilon_pilon0224020 Alkaloid CYP719 medium borderline
Pambctg015950_pilon_pilon_pilon0261170 Alkaloid CYP719 medium borderline
Pambctg015950_pilon_pilon_pilon0261200 Alkaloid CYP719 medium borderline
Pambctg000660_pilon_pilon_pilon0005360 Alkaloid CYP80B1 medium borderline
Pambctg001390_pilon_pilon_pilon0021650 Alkaloid CYP80B1 medium borderline
Pambctg006180_pilon_pilon_pilon0087090 Alkaloid CYP80B1 medium borderline
Pambctg009050_pilon_pilon_pilon0125380 Alkaloid CYP80B1 medium borderline
Pambctg011450_pilon_pilon_pilon0173870 Alkaloid CYP80B1 medium borderline
Pambctg012150_pilon_pilon_pilon0187840 Alkaloid CYP80B1 medium borderline
Pambctg013180_pilon_pilon_pilon0200110 Alkaloid CYP80B1 medium borderline
Pambctg013180_pilon_pilon_pilon0200150 Alkaloid CYP80B1 medium borderline
Pambctg005750_pilon_pilon_pilon0080840 Alkaloid CYP80F1 medium borderline
Pambctg007500_pilon_pilon_pilon0110610 Alkaloid CYP80F1 low borderline
Pambctg000990_pilon_pilon_pilon0010110 Alkaloid G8O/G8H medium borderline
Pambctg001190_pilon_pilon_pilon0016530 Alkaloid G8O/G8H medium borderline
Pambctg001280_pilon_pilon_pilon0019350 Alkaloid G8O/G8H medium borderline
Pambctg001390_pilon_pilon_pilon0021440 Alkaloid G8O/G8H medium borderline
Pambctg001390_pilon_pilon_pilon0021620 Alkaloid G8O/G8H medium borderline
Pambctg001390_pilon_pilon_pilon0021720 Alkaloid G8O/G8H medium borderline
Pambctg001400_pilon_pilon_pilon0022340 Alkaloid G8O/G8H low borderline
Pambctg001410_pilon_pilon_pilon0022910 Alkaloid G8O/G8H medium borderline
Pambctg001420_pilon_pilon_pilon0023550 Alkaloid G8O/G8H low borderline
Pambctg001420_pilon_pilon_pilon0023560 Alkaloid G8O/G8H medium borderline
Pambctg001600_pilon_pilon_pilon0025900 Alkaloid G8O/G8H low borderline
Pambctg002320_pilon_pilon_pilon0039230 Alkaloid G8O/G8H medium borderline
Pambctg004320_pilon_pilon_pilon0065650 Alkaloid G8O/G8H medium borderline
Pambctg004370_pilon_pilon_pilon0067470 Alkaloid G8O/G8H medium borderline
Pambctg006050_pilon_pilon_pilon0084940 Alkaloid G8O/G8H medium borderline
Pambctg006180_pilon_pilon_pilon0087100 Alkaloid G8O/G8H medium borderline
Pambctg007140_pilon_pilon_pilon0102680 Alkaloid G8O/G8H medium borderline
Pambctg007490_pilon_pilon_pilon0109540 Alkaloid G8O/G8H medium pass
Pambctg011350_pilon_pilon_pilon0171560 Alkaloid G8O/G8H medium borderline
Pambctg013220_pilon_pilon_pilon0200620 Alkaloid G8O/G8H medium borderline
Pambctg014050_pilon_pilon_pilon0223010 Alkaloid G8O/G8H medium borderline
Pambctg014400_pilon_pilon_pilon0233490 Alkaloid G8O/G8H medium borderline
Pambctg014850_pilon_pilon_pilon0235100 Alkaloid G8O/G8H medium borderline
Pambctg015490_pilon_pilon_pilon0248290 Alkaloid G8O/G8H medium borderline
Pambctg000470_pilon_pilon_pilon0001760 Alkaloid GES low borderline
Pambctg003530_pilon_pilon_pilon0054220 Alkaloid GES low borderline
Pambctg004370_pilon_pilon_pilon0067540 Alkaloid GES low borderline
Pambctg008730_pilon_pilon_pilon0118900 Alkaloid GES medium pass
Pambctg009730_pilon_pilon_pilon0149210 Alkaloid GES low borderline
Pambctg009780_pilon_pilon_pilon0152060 Alkaloid GES medium pass
Pambctg011440_pilon_pilon_pilon0173700 Alkaloid GES medium pass
Pambctg014380_pilon_pilon_pilon0231670 Alkaloid GES low borderline
Pambctg000510_pilon_pilon_pilon0002360 Alkaloid GS low borderline
Pambctg000510_pilon_pilon_pilon0002370 Alkaloid GS low borderline
Pambctg000510_pilon_pilon_pilon0002390 Alkaloid GS low borderline
Pambctg000680_pilon_pilon_pilon0005940 Alkaloid GS low borderline
Pambctg000680_pilon_pilon_pilon0005960 Alkaloid GS low borderline