PlantSME Plant secondary metabolism enzyme database

Panax quinquefolius (panax_quinquefolius)

Imported from atlas release summary for Panax quinquefolius.

2322
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 718 20 BAHD (277) View species results
Phenylpropanoid pathway 501 11 POD (227) View species results
Alkaloid pathway 477 21 NMT (91) View species results
Flavonoid pathway 258 11 UFGT (162) View species results
Rosmarinic acid pathway 205 7 C4H (65) View species results
Steroid pathway 163 11 CAS (75) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2204 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 480 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
panax_quinquefolius_GWHPBEIR005869.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR013427.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR013437.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR017210.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR017748.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR018233.1 Alkaloid IO low borderline
panax_quinquefolius_GWHPBEIR018234.1 Alkaloid IO low borderline
panax_quinquefolius_GWHPBEIR022728.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR030835.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR031251.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR031257.1 Alkaloid IO low borderline
panax_quinquefolius_GWHPBEIR032034.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR035373.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR038684.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR039908.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR040115.1 Alkaloid IO low borderline
panax_quinquefolius_GWHPBEIR045227.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR046551.1 Alkaloid IO high pass
panax_quinquefolius_GWHPBEIR049029.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR054343.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR054722.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR054723.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR054724.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR054725.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR054735.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR056275.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR058119.1 Alkaloid IO low borderline
panax_quinquefolius_GWHPBEIR063212.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR063295.1 Alkaloid IO medium borderline
panax_quinquefolius_GWHPBEIR063296.1 Alkaloid IO medium borderline