PlantSME Plant secondary metabolism enzyme database

Panax quinquefolius (panax_quinquefolius)

Imported from atlas release summary for Panax quinquefolius.

2322
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 718 20 BAHD (277) View species results
Phenylpropanoid pathway 501 11 POD (227) View species results
Alkaloid pathway 477 21 NMT (91) View species results
Flavonoid pathway 258 11 UFGT (162) View species results
Rosmarinic acid pathway 205 7 C4H (65) View species results
Steroid pathway 163 11 CAS (75) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2204 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 480 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMK
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Gene Pathway Family Confidence Status
panax_quinquefolius_GWHPBEIR005603.1 Terpenoid PMK medium pass
panax_quinquefolius_GWHPBEIR015352.1 Terpenoid PMK medium pass
panax_quinquefolius_GWHPBEIR022654.1 Terpenoid PMK low borderline
panax_quinquefolius_GWHPBEIR024124.1 Terpenoid PMK medium pass
panax_quinquefolius_GWHPBEIR025659.1 Terpenoid PMK low borderline
panax_quinquefolius_GWHPBEIR030801.1 Terpenoid PMK medium pass
panax_quinquefolius_GWHPBEIR035762.1 Terpenoid PMK medium pass
panax_quinquefolius_GWHPBEIR039316.1 Terpenoid PMK low borderline
panax_quinquefolius_GWHPBEIR043900.1 Terpenoid PMK medium pass
panax_quinquefolius_GWHPBEIR044069.1 Terpenoid PMK low borderline
panax_quinquefolius_GWHPBEIR051844.1 Terpenoid PMK medium pass
panax_quinquefolius_GWHPBEIR053539.1 Terpenoid PMK low borderline
panax_quinquefolius_GWHPBEIR053554.1 Terpenoid PMK medium pass
panax_quinquefolius_GWHPBEIR060083.1 Terpenoid PMK medium pass
panax_quinquefolius_GWHPBEIR062454.1 Terpenoid PMK medium pass
panax_quinquefolius_GWHPBEIR062847.1 Terpenoid PMK medium pass
panax_quinquefolius_GWHPBEIR063911.1 Terpenoid PMK medium pass