Panax quinquefolius (panax_quinquefolius)
Imported from atlas release summary for Panax quinquefolius.
2987
Candidate Protein Records
2322
Pathway-Level Records
5923
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
5923
Family-Level Calls
C4H
6.18%
BAHD
6.15%
C3'H/CYP98A
5.57%
POD
4.31%
UGT
3.87%
4CL
3.7%
IFS
3.7%
7DLGT
3.46%
Other Families
63.08%
More Families (97)
CYP76
194
3.28%
UFGT
193
3.26%
T3O
175
2.95%
NMT
160
2.7%
F3H
148
2.5%
DWF4/CYP90B1
128
2.16%
F3'H/CYP75B
119
2.01%
STR
105
1.77%
BR6OX2/CYP85A2
103
1.74%
BBE
96
1.62%
CYP71
91
1.54%
CAD
90
1.52%
CODM/T6ODM
87
1.47%
CAS
84
1.42%
CSE
76
1.28%
SMT1/SMT2/SMT3
74
1.25%
CYP90D1
71
1.2%
HCT
66
1.11%
TRI/TRII
64
1.08%
H6H
59
1.0%
LAC
59
1.0%
T16H
58
0.98%
GS
54
0.91%
PAL
54
0.91%
TPS
54
0.91%
PYKS
52
0.88%
IFR
52
0.88%
RAS
50
0.84%
GES
49
0.83%
NCS
47
0.79%
SLS
46
0.78%
7DLH
45
0.76%
F5H/CYP84A
43
0.73%
TAT
43
0.73%
G8O/G8H
38
0.64%
COMT
38
0.64%
PMT
36
0.61%
FNS
35
0.59%
SQE
31
0.52%
IO
30
0.51%
ANR
28
0.47%
F3'5'H/CYP75A
27
0.46%
COR
26
0.44%
SGD
25
0.42%
CYP51G1
25
0.42%
16OMT
24
0.41%
8HGO
23
0.39%
CPR
21
0.35%
ROT3/CYP90C1
21
0.35%
CPD/CYP90A1
21
0.35%
LAMT
19
0.32%
CCR
19
0.32%
BR6OX1/CYP85A1
19
0.32%
CYP719
17
0.29%
DFR
17
0.29%
ANS/LDOX
17
0.29%
PMK
17
0.29%
MPO
15
0.25%
CYP80B1
15
0.25%
DET2
15
0.25%
HMGR
15
0.25%
GGPPS
15
0.25%
HPPR
13
0.22%
SQS/FDFT1
13
0.22%
CNMT
12
0.2%
DXS
12
0.2%
AACT
12
0.2%
FPPS
11
0.19%
CHS
10
0.17%
ISY
9
0.15%
XMT_MXMT_DXMT
8
0.14%
CCoAOMT
8
0.14%
MVD
7
0.12%
HMGS
7
0.12%
ADC
6
0.1%
TYDC_DDC
6
0.1%
CHI
6
0.1%
SMO1/SMO2
6
0.1%
MVK
6
0.1%
TDC
5
0.08%
FLS
4
0.07%
HYD1
4
0.07%
DXR
4
0.07%
CYP80F1
3
0.05%
DWF7
3
0.05%
HDS/IspG
3
0.05%
MDS/IspF
3
0.05%
HDR/IspH
3
0.05%
MCT/IspD
3
0.05%
DWF1
2
0.03%
DWF5
2
0.03%
FK
2
0.03%
6OMT_4OMT_SOMT
1
0.02%
CPI1
1
0.02%
CMK/IspE
1
0.02%
GPPS
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 718 | 20 | BAHD (277) | View species results |
| Phenylpropanoid pathway | 501 | 11 | POD (227) | View species results |
| Alkaloid pathway | 477 | 21 | NMT (91) | View species results |
| Flavonoid pathway | 258 | 11 | UFGT (162) | View species results |
| Rosmarinic acid pathway | 205 | 7 | C4H (65) | View species results |
| Steroid pathway | 163 | 11 | CAS (75) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2204 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 480 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| panax_quinquefolius_GWHPBEIR052787.1 | Alkaloid | H6H | low | borderline |
| panax_quinquefolius_GWHPBEIR054750.1 | Alkaloid | H6H | medium | borderline |
| panax_quinquefolius_GWHPBEIR057565.1 | Alkaloid | H6H | low | borderline |
| panax_quinquefolius_GWHPBEIR057719.1 | Alkaloid | H6H | low | borderline |
| panax_quinquefolius_GWHPBEIR057720.1 | Alkaloid | H6H | low | borderline |
| panax_quinquefolius_GWHPBEIR057721.1 | Alkaloid | H6H | low | borderline |
| panax_quinquefolius_GWHPBEIR058774.1 | Alkaloid | H6H | low | borderline |
| panax_quinquefolius_GWHPBEIR059118.1 | Alkaloid | H6H | medium | borderline |
| panax_quinquefolius_GWHPBEIR062027.1 | Alkaloid | H6H | low | borderline |
| panax_quinquefolius_GWHPBEIR063635.1 | Alkaloid | H6H | medium | borderline |
| panax_quinquefolius_GWHPBEIR005869.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR013427.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR013437.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR017210.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR017748.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR018233.1 | Alkaloid | IO | low | borderline |
| panax_quinquefolius_GWHPBEIR018234.1 | Alkaloid | IO | low | borderline |
| panax_quinquefolius_GWHPBEIR022728.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR030835.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR031251.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR031257.1 | Alkaloid | IO | low | borderline |
| panax_quinquefolius_GWHPBEIR032034.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR035373.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR038684.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR039908.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR040115.1 | Alkaloid | IO | low | borderline |
| panax_quinquefolius_GWHPBEIR045227.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR046551.1 | Alkaloid | IO | high | pass |
| panax_quinquefolius_GWHPBEIR049029.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR054343.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR054722.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR054723.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR054724.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR054725.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR054735.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR056275.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR058119.1 | Alkaloid | IO | low | borderline |
| panax_quinquefolius_GWHPBEIR063212.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR063295.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR063296.1 | Alkaloid | IO | medium | borderline |
| panax_quinquefolius_GWHPBEIR003651.1 | Alkaloid | ISY | medium | pass |
| panax_quinquefolius_GWHPBEIR019682.1 | Alkaloid | ISY | high | pass |
| panax_quinquefolius_GWHPBEIR023594.1 | Alkaloid | ISY | high | pass |
| panax_quinquefolius_GWHPBEIR030989.1 | Alkaloid | ISY | low | borderline |
| panax_quinquefolius_GWHPBEIR032921.1 | Alkaloid | ISY | low | borderline |
| panax_quinquefolius_GWHPBEIR035296.1 | Alkaloid | ISY | medium | pass |
| panax_quinquefolius_GWHPBEIR042434.1 | Alkaloid | ISY | high | pass |
| panax_quinquefolius_GWHPBEIR058220.1 | Alkaloid | ISY | medium | pass |
| panax_quinquefolius_GWHPBEIR060955.1 | Alkaloid | ISY | medium | pass |
| panax_quinquefolius_GWHPBEIR003874.1 | Alkaloid | LAMT | medium | borderline |