PlantSME Plant secondary metabolism enzyme database

Panicum hallii (panicum_hallii)

Imported from atlas release summary for Panicum hallii.

2136
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 570 20 BAHD (217) View species results
Alkaloid pathway 494 21 7DLGT (88) View species results
Phenylpropanoid pathway 437 11 POD (218) View species results
Flavonoid pathway 289 10 UFGT (178) View species results
Rosmarinic acid pathway 195 7 C4H (101) View species results
Steroid pathway 151 11 SMT1/SMT2/SMT3 (55) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1901 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 389 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
Reset
Gene Pathway Family Confidence Status
Phal02G0028140.1 Rosmarinic Acid C4H low borderline
Phal02G0028250.1 Rosmarinic Acid C4H medium pass
Phal02G0030850.1 Rosmarinic Acid C4H low borderline
Phal02G0035320.1 Rosmarinic Acid C4H low borderline
Phal02G0035320.2 Rosmarinic Acid C4H low borderline
Phal02G0035320.3 Rosmarinic Acid C4H low borderline
Phal02G0035320.4 Rosmarinic Acid C4H low borderline
Phal02G0035320.5 Rosmarinic Acid C4H low borderline
Phal02G0035320.6 Rosmarinic Acid C4H low borderline
Phal02G0036030.1 Rosmarinic Acid C4H low borderline
Phal02G0037890.1 Rosmarinic Acid C4H medium pass
Phal02G0039910.1 Rosmarinic Acid C4H low borderline
Phal02G0040670.1 Rosmarinic Acid C4H low borderline
Phal02G0040670.3 Rosmarinic Acid C4H low borderline
Phal02G0040820.1 Rosmarinic Acid C4H low borderline
Phal02G0042390.1 Rosmarinic Acid C4H medium pass
Phal02G0042790.1 Rosmarinic Acid C4H low borderline
Phal02G0042790.2 Rosmarinic Acid C4H low borderline
Phal02G0042790.3 Rosmarinic Acid C4H low borderline
Phal03G0001000.1 Rosmarinic Acid C4H low borderline
Phal03G0001010.1 Rosmarinic Acid C4H low borderline
Phal03G0002200.1 Rosmarinic Acid C4H low borderline
Phal03G0005400.1 Rosmarinic Acid C4H medium pass
Phal03G0005410.1 Rosmarinic Acid C4H low borderline
Phal03G0013470.1 Rosmarinic Acid C4H low borderline
Phal03G0014160.1 Rosmarinic Acid C4H low borderline
Phal03G0014380.1 Rosmarinic Acid C4H low borderline
Phal03G0016220.1 Rosmarinic Acid C4H low borderline
Phal03G0016220.2 Rosmarinic Acid C4H medium pass
Phal03G0020820.1 Rosmarinic Acid C4H medium pass
Phal03G0020830.1 Rosmarinic Acid C4H low borderline
Phal03G0020850.1 Rosmarinic Acid C4H medium pass
Phal03G0022370.1 Rosmarinic Acid C4H medium pass
Phal03G0023000.1 Rosmarinic Acid C4H low borderline
Phal03G0023420.1 Rosmarinic Acid C4H low borderline
Phal03G0026470.1 Rosmarinic Acid C4H low borderline
Phal03G0026480.1 Rosmarinic Acid C4H medium pass
Phal03G0027510.1 Rosmarinic Acid C4H low borderline
Phal03G0031560.1 Rosmarinic Acid C4H medium pass
Phal03G0032330.1 Rosmarinic Acid C4H medium pass
Phal03G0039550.1 Rosmarinic Acid C4H medium pass
Phal03G0039560.1 Rosmarinic Acid C4H medium pass
Phal03G0040360.1 Rosmarinic Acid C4H medium pass
Phal03G0040360.2 Rosmarinic Acid C4H medium pass
Phal03G0040360.3 Rosmarinic Acid C4H medium pass
Phal03G0040360.4 Rosmarinic Acid C4H medium pass
Phal03G0040360.5 Rosmarinic Acid C4H low borderline
Phal03G0040360.6 Rosmarinic Acid C4H low borderline
Phal03G0040360.7 Rosmarinic Acid C4H low borderline
Phal03G0040370.1 Rosmarinic Acid C4H medium pass