PlantSME Plant secondary metabolism enzyme database

Panicum hallii (panicum_hallii)

Imported from atlas release summary for Panicum hallii.

2136
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 570 20 BAHD (217) View species results
Alkaloid pathway 494 21 7DLGT (88) View species results
Phenylpropanoid pathway 437 11 POD (218) View species results
Flavonoid pathway 289 10 UFGT (178) View species results
Rosmarinic acid pathway 195 7 C4H (101) View species results
Steroid pathway 151 11 SMT1/SMT2/SMT3 (55) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1901 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 389 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Phal03G0002200.1 Alkaloid T3O medium pass
Phal03G0005400.1 Alkaloid T3O medium borderline
Phal03G0010170.1 Alkaloid T3O medium pass
Phal03G0013470.1 Alkaloid T3O medium pass
Phal03G0014160.1 Alkaloid T3O medium pass
Phal03G0014380.1 Alkaloid T3O medium pass
Phal03G0020820.1 Alkaloid T3O medium borderline
Phal03G0022370.1 Alkaloid T3O medium borderline
Phal03G0023420.1 Alkaloid T3O medium borderline
Phal03G0025060.1 Alkaloid T3O low borderline
Phal03G0026890.1 Alkaloid T3O low borderline
Phal03G0028880.1 Alkaloid T3O medium pass
Phal03G0032330.1 Alkaloid T3O medium borderline
Phal03G0039550.1 Alkaloid T3O medium borderline
Phal03G0039560.1 Alkaloid T3O medium borderline
Phal03G0043040.1 Alkaloid T3O medium borderline
Phal03G0043970.1 Alkaloid T3O medium borderline
Phal04G0006960.1 Alkaloid T3O medium borderline
Phal04G0006980.1 Alkaloid T3O medium borderline
Phal04G0008010.1 Alkaloid T3O medium borderline
Phal04G0010240.1 Alkaloid T3O medium borderline
Phal04G0010450.1 Alkaloid T3O medium pass
Phal04G0017820.1 Alkaloid T3O medium borderline
Phal04G0017830.1 Alkaloid T3O medium borderline
Phal05G0001250.1 Alkaloid T3O medium borderline
Phal05G0005470.1 Alkaloid T3O medium pass
Phal05G0008010.1 Alkaloid T3O medium pass
Phal05G0008190.1 Alkaloid T3O medium borderline
Phal05G0008240.1 Alkaloid T3O low borderline
Phal05G0011810.1 Alkaloid T3O medium pass
Phal05G0011820.1 Alkaloid T3O medium pass
Phal05G0011840.1 Alkaloid T3O medium borderline
Phal05G0018580.1 Alkaloid T3O medium pass
Phal05G0043750.1 Alkaloid T3O medium pass
Phal05G0043760.1 Alkaloid T3O medium pass
Phal05G0043760.2 Alkaloid T3O low borderline
Phal05G0044650.1 Alkaloid T3O medium pass
Phal05G0045590.1 Alkaloid T3O low borderline
Phal05G0046760.1 Alkaloid T3O medium borderline
Phal05G0046780.1 Alkaloid T3O medium borderline
Phal05G0046790.1 Alkaloid T3O medium borderline
Phal05G0046800.1 Alkaloid T3O medium borderline
Phal06G0000340.1 Alkaloid T3O medium borderline
Phal06G0000360.1 Alkaloid T3O medium borderline
Phal06G0000370.1 Alkaloid T3O medium borderline
Phal06G0001080.1 Alkaloid T3O medium pass
Phal06G0001080.2 Alkaloid T3O medium pass
Phal06G0004920.1 Alkaloid T3O medium borderline
Phal06G0011650.1 Alkaloid T3O medium borderline
Phal06G0011650.2 Alkaloid T3O medium borderline