PlantSME Plant secondary metabolism enzyme database

Panicum hallii (panicum_hallii)

Imported from atlas release summary for Panicum hallii.

2136
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 570 20 BAHD (217) View species results
Alkaloid pathway 494 21 7DLGT (88) View species results
Phenylpropanoid pathway 437 11 POD (218) View species results
Flavonoid pathway 289 10 UFGT (178) View species results
Rosmarinic acid pathway 195 7 C4H (101) View species results
Steroid pathway 151 11 SMT1/SMT2/SMT3 (55) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1901 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 389 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Phal06G0013190.1 Alkaloid T3O medium borderline
Phal06G0014560.1 Alkaloid T3O medium borderline
Phal06G0015400.1 Alkaloid T3O medium borderline
Phal06G0017130.1 Alkaloid T3O medium borderline
Phal06G0017620.1 Alkaloid T3O medium borderline
Phal06G0017630.1 Alkaloid T3O medium borderline
Phal06G0017630.2 Alkaloid T3O medium borderline
Phal06G0023650.1 Alkaloid T3O medium borderline
Phal07G0000170.1 Alkaloid T3O medium borderline
Phal07G0000970.1 Alkaloid T3O medium borderline
Phal07G0006550.1 Alkaloid T3O medium borderline
Phal07G0006560.1 Alkaloid T3O medium borderline
Phal07G0006580.1 Alkaloid T3O medium borderline
Phal07G0013170.1 Alkaloid T3O medium pass
Phal07G0013170.2 Alkaloid T3O medium pass
Phal07G0013170.3 Alkaloid T3O medium pass
Phal07G0013170.4 Alkaloid T3O medium pass
Phal07G0015340.1 Alkaloid T3O medium borderline
Phal07G0015350.1 Alkaloid T3O medium borderline
Phal07G0015360.1 Alkaloid T3O medium borderline
Phal07G0019630.1 Alkaloid T3O low borderline
Phal07G0020300.1 Alkaloid T3O medium pass
Phal07G0020310.1 Alkaloid T3O medium pass
Phal07G0020310.2 Alkaloid T3O medium pass
Phal08G0002190.1 Alkaloid T3O low borderline
Phal08G0002540.1 Alkaloid T3O medium pass
Phal08G0007740.1 Alkaloid T3O medium pass
Phal08G0010110.1 Alkaloid T3O medium pass
Phal08G0011240.1 Alkaloid T3O medium borderline
Phal08G0012130.1 Alkaloid T3O medium borderline
Phal08G0012140.1 Alkaloid T3O medium borderline
Phal08G0013330.1 Alkaloid T3O medium pass
Phal08G0013470.1 Alkaloid T3O medium borderline
Phal08G0015760.1 Alkaloid T3O medium pass
Phal08G0018200.1 Alkaloid T3O medium borderline
Phal08G0020170.1 Alkaloid T3O medium borderline
Phal09G0001030.1 Alkaloid T3O medium borderline
Phal09G0001040.1 Alkaloid T3O medium borderline
Phal09G0001060.1 Alkaloid T3O medium borderline
Phal09G0007270.1 Alkaloid T3O low borderline
Phal09G0007750.1 Alkaloid T3O medium borderline
Phal09G0007760.1 Alkaloid T3O medium borderline
Phal09G0007770.1 Alkaloid T3O medium borderline
Phal09G0007780.1 Alkaloid T3O medium borderline
Phal09G0009210.1 Alkaloid T3O medium borderline
Phal09G0012530.1 Alkaloid T3O medium borderline
Phal09G0014240.1 Alkaloid T3O low borderline
Phal09G0016630.1 Alkaloid T3O medium pass
Phal09G0016650.1 Alkaloid T3O medium borderline
Phal09G0016890.1 Alkaloid T3O medium borderline