PlantSME Plant secondary metabolism enzyme database

Panicum hallii (panicum_hallii)

Imported from atlas release summary for Panicum hallii.

2450
Candidate Protein Records
2136
Pathway-Level Records
5064
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 570 20 BAHD (217) View species results
Alkaloid pathway 494 21 7DLGT (88) View species results
Phenylpropanoid pathway 437 11 POD (218) View species results
Flavonoid pathway 289 10 UFGT (178) View species results
Rosmarinic acid pathway 195 7 C4H (101) View species results
Steroid pathway 151 11 SMT1/SMT2/SMT3 (55) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1901 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 389 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Phal09G0035730.1 Alkaloid ISY medium pass
Phal09G0035740.1 Alkaloid ISY medium pass
Phal09G0035760.1 Alkaloid ISY medium pass
Phal09G0035770.1 Alkaloid ISY medium pass
Phal01G0030660.1 Alkaloid LAMT medium borderline
Phal01G0030660.2 Alkaloid LAMT medium borderline
Phal03G0005940.1 Alkaloid LAMT low borderline
Phal04G0012190.1 Alkaloid LAMT medium borderline
Phal04G0012190.2 Alkaloid LAMT medium borderline
Phal04G0020660.1 Alkaloid LAMT medium borderline
Phal09G0037230.1 Alkaloid LAMT medium borderline
Phal01G0022340.1 Alkaloid MPO medium pass
Phal01G0022340.2 Alkaloid MPO medium pass
Phal02G0007190.1 Alkaloid MPO medium pass
Phal02G0008600.1 Alkaloid MPO low borderline
Phal02G0029190.1 Alkaloid MPO high pass
Phal02G0035870.1 Alkaloid MPO high pass
Phal07G0002790.1 Alkaloid MPO medium pass
Phal07G0013570.1 Alkaloid MPO high pass
Phal02G0007340.1 Alkaloid NCS medium borderline
Phal02G0007850.1 Alkaloid NCS medium borderline
Phal02G0007850.2 Alkaloid NCS medium borderline
Phal02G0014130.1 Alkaloid NCS medium pass
Phal02G0014140.1 Alkaloid NCS medium pass
Phal03G0011410.1 Alkaloid NCS medium borderline
Phal03G0011420.1 Alkaloid NCS medium borderline
Phal03G0013260.1 Alkaloid NCS medium borderline
Phal04G0021120.1 Alkaloid NCS medium borderline
Phal04G0023140.3 Alkaloid NCS medium borderline
Phal04G0023140.4 Alkaloid NCS medium borderline
Phal04G0023140.5 Alkaloid NCS medium borderline
Phal04G0023140.6 Alkaloid NCS medium borderline
Phal04G0023140.7 Alkaloid NCS medium borderline
Phal04G0023140.8 Alkaloid NCS medium borderline
Phal05G0033860.1 Alkaloid NCS medium borderline
Phal05G0033880.1 Alkaloid NCS medium borderline
Phal05G0033890.1 Alkaloid NCS medium borderline
Phal05G0044170.1 Alkaloid NCS medium borderline
Phal05G0044170.2 Alkaloid NCS medium borderline
Phal07G0005350.1 Alkaloid NCS medium pass
Phal07G0005360.1 Alkaloid NCS medium pass
Phal07G0007900.1 Alkaloid NCS medium borderline
Phal07G0013490.1 Alkaloid NCS medium borderline
Phal07G0013500.1 Alkaloid NCS medium borderline
Phal07G0021770.1 Alkaloid NCS medium pass
Phal07G0021770.2 Alkaloid NCS medium pass
Phal07G0027100.1 Alkaloid NCS medium borderline
Phal07G0027120.1 Alkaloid NCS medium borderline
Phal08G0005280.1 Alkaloid NCS medium borderline
Phal09G0000480.1 Alkaloid NCS medium borderline