PlantSME Plant secondary metabolism enzyme database

Panicum hallii (panicum_hallii)

Imported from atlas release summary for Panicum hallii.

2136
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 570 20 BAHD (217) View species results
Alkaloid pathway 494 21 7DLGT (88) View species results
Phenylpropanoid pathway 437 11 POD (218) View species results
Flavonoid pathway 289 10 UFGT (178) View species results
Rosmarinic acid pathway 195 7 C4H (101) View species results
Steroid pathway 151 11 SMT1/SMT2/SMT3 (55) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1901 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 389 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Gene Pathway Family Confidence Status
Phal01G0011880.1 Alkaloid 7DLGT low borderline
Phal01G0021230.1 Alkaloid 7DLGT medium pass
Phal01G0021510.1 Alkaloid 7DLGT medium pass
Phal01G0021520.1 Alkaloid 7DLGT medium pass
Phal01G0025240.1 Alkaloid 7DLGT low borderline
Phal01G0033360.1 Alkaloid 7DLGT medium pass
Phal01G0033370.1 Alkaloid 7DLGT medium pass
Phal01G0033380.1 Alkaloid 7DLGT medium pass
Phal02G0002620.1 Alkaloid 7DLGT low borderline
Phal02G0006500.1 Alkaloid 7DLGT low borderline
Phal02G0006550.1 Alkaloid 7DLGT low borderline
Phal02G0007830.1 Alkaloid 7DLGT high pass
Phal02G0007930.1 Alkaloid 7DLGT medium pass
Phal02G0007940.1 Alkaloid 7DLGT medium pass
Phal02G0007950.1 Alkaloid 7DLGT medium pass
Phal02G0007960.1 Alkaloid 7DLGT medium pass
Phal02G0007980.1 Alkaloid 7DLGT medium pass
Phal02G0009410.1 Alkaloid 7DLGT low borderline
Phal02G0009830.1 Alkaloid 7DLGT medium pass
Phal02G0014360.1 Alkaloid 7DLGT low borderline
Phal02G0016080.1 Alkaloid 7DLGT low borderline
Phal02G0017870.1 Alkaloid 7DLGT low borderline
Phal02G0017930.1 Alkaloid 7DLGT medium pass
Phal02G0017960.1 Alkaloid 7DLGT medium pass
Phal02G0027370.1 Alkaloid 7DLGT medium pass
Phal02G0027380.1 Alkaloid 7DLGT low borderline
Phal02G0027400.1 Alkaloid 7DLGT low borderline
Phal02G0027420.1 Alkaloid 7DLGT medium pass
Phal02G0031530.1 Alkaloid 7DLGT low borderline
Phal02G0031540.1 Alkaloid 7DLGT medium pass
Phal02G0031560.1 Alkaloid 7DLGT high pass
Phal02G0031570.1 Alkaloid 7DLGT medium pass
Phal02G0032190.1 Alkaloid 7DLGT low borderline
Phal02G0032200.1 Alkaloid 7DLGT low borderline
Phal02G0032210.1 Alkaloid 7DLGT medium pass
Phal02G0032230.1 Alkaloid 7DLGT low borderline
Phal02G0032250.1 Alkaloid 7DLGT low borderline
Phal02G0032270.1 Alkaloid 7DLGT medium pass
Phal02G0039030.1 Alkaloid 7DLGT medium pass
Phal02G0041530.1 Alkaloid 7DLGT low borderline
Phal02G0042090.1 Alkaloid 7DLGT low borderline
Phal03G0006430.1 Alkaloid 7DLGT medium pass
Phal03G0007470.1 Alkaloid 7DLGT medium pass
Phal03G0013220.1 Alkaloid 7DLGT low borderline
Phal03G0013240.1 Alkaloid 7DLGT low borderline
Phal03G0013370.1 Alkaloid 7DLGT low borderline
Phal03G0018310.1 Alkaloid 7DLGT medium pass
Phal03G0019920.1 Alkaloid 7DLGT low borderline
Phal03G0019940.1 Alkaloid 7DLGT medium pass
Phal03G0019950.1 Alkaloid 7DLGT medium pass