PlantSME Plant secondary metabolism enzyme database

Panicum hallii (panicum_hallii)

Imported from atlas release summary for Panicum hallii.

2450
Candidate Protein Records
2136
Pathway-Level Records
5064
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 570 20 BAHD (217) View species results
Alkaloid pathway 494 21 7DLGT (88) View species results
Phenylpropanoid pathway 437 11 POD (218) View species results
Flavonoid pathway 289 10 UFGT (178) View species results
Rosmarinic acid pathway 195 7 C4H (101) View species results
Steroid pathway 151 11 SMT1/SMT2/SMT3 (55) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1901 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 389 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Phal09G0050630.3 Alkaloid 8HGO medium borderline
Phal09G0050640.1 Alkaloid 8HGO medium borderline
Phal09G0050650.1 Alkaloid 8HGO medium borderline
Phal09G0050660.1 Alkaloid 8HGO medium borderline
Phal09G0050660.2 Alkaloid 8HGO medium borderline
Phal04G0027140.1 Alkaloid ADC medium pass
Phal01G0009670.1 Alkaloid BBE medium borderline
Phal02G0003330.1 Alkaloid BBE low borderline
Phal04G0011080.1 Alkaloid BBE medium borderline
Phal04G0011090.1 Alkaloid BBE medium borderline
Phal04G0011100.1 Alkaloid BBE medium borderline
Phal04G0011110.1 Alkaloid BBE medium borderline
Phal04G0011120.1 Alkaloid BBE medium borderline
Phal04G0011130.1 Alkaloid BBE medium borderline
Phal04G0011140.1 Alkaloid BBE medium borderline
Phal04G0011150.1 Alkaloid BBE medium borderline
Phal06G0003860.1 Alkaloid BBE medium borderline
Phal06G0003870.1 Alkaloid BBE medium borderline
Phal06G0003880.1 Alkaloid BBE medium borderline
Phal06G0020270.1 Alkaloid BBE medium borderline
Phal07G0007850.1 Alkaloid BBE medium borderline
Phal08G0012020.1 Alkaloid BBE medium borderline
Phal08G0012030.1 Alkaloid BBE medium borderline
Phal01G0005220.1 Alkaloid CNMT low borderline
Phal01G0005220.2 Alkaloid CNMT low borderline
Phal02G0010260.1 Alkaloid CNMT low borderline
Phal02G0010580.1 Alkaloid CNMT medium pass
Phal02G0010590.1 Alkaloid CNMT medium pass
Phal02G0010590.2 Alkaloid CNMT medium pass
Phal03G0042380.1 Alkaloid CNMT low borderline
Phal04G0009940.1 Alkaloid CNMT medium borderline
Phal04G0024760.1 Alkaloid CNMT low borderline
Phal04G0025580.1 Alkaloid CNMT low borderline
Phal04G0025580.2 Alkaloid CNMT low borderline
Phal04G0025580.3 Alkaloid CNMT low borderline
Phal05G0027900.1 Alkaloid CNMT low borderline
Phal05G0039220.1 Alkaloid CNMT low borderline
Phal08G0008640.1 Alkaloid CNMT low borderline
Phal08G0015420.1 Alkaloid CNMT low borderline
Phal09G0001370.1 Alkaloid CNMT low borderline
Phal09G0001370.2 Alkaloid CNMT low borderline
Phal09G0002490.1 Alkaloid CNMT low borderline
Phal01G0000050.1 Alkaloid CODM/T6ODM medium borderline
Phal01G0024930.1 Alkaloid CODM/T6ODM medium borderline
Phal01G0034110.1 Alkaloid CODM/T6ODM medium borderline
Phal01G0034480.1 Alkaloid CODM/T6ODM medium borderline
Phal01G0037950.1 Alkaloid CODM/T6ODM medium borderline
Phal02G0003730.1 Alkaloid CODM/T6ODM medium borderline
Phal02G0003730.2 Alkaloid CODM/T6ODM medium borderline
Phal02G0012510.1 Alkaloid CODM/T6ODM medium borderline