Phaeoceros laevis (phaeoceros_laevis)
Imported from atlas release summary for Phaeoceros laevis.
447
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
447
Candidate Genes
C4H
10.31%
C3'H/CYP98A
7.1%
CYP76
5.56%
BAHD
4.82%
POD
4.42%
4CL
3.61%
IFS
3.41%
NMT
3.01%
Other Families
57.76%
More Families (92)
T3O
45
3.01%
DWF4/CYP90B1
45
3.01%
G8O/G8H
44
2.95%
F3'5'H/CYP75A
35
2.34%
F3'H/CYP75B
35
2.34%
STR
32
2.14%
IFR
28
1.87%
F3H
26
1.74%
TRI/TRII
24
1.61%
GS
23
1.54%
BR6OX2/CYP85A2
23
1.54%
SMT1/SMT2/SMT3
19
1.27%
H6H
18
1.2%
CODM/T6ODM
18
1.2%
CAS
17
1.14%
T16H
16
1.07%
SLS
15
1.0%
CYP71
15
1.0%
PYKS
14
0.94%
FNS
14
0.94%
COMT
14
0.94%
CAD
14
0.94%
IO
13
0.87%
ROT3/CYP90C1
13
0.87%
TPS
13
0.87%
RAS
11
0.74%
F5H/CYP84A
10
0.67%
LAC
10
0.67%
CPD/CYP90A1
10
0.67%
16OMT
9
0.6%
ANR
9
0.6%
BR6OX1/CYP85A1
9
0.6%
CNMT
8
0.54%
PMT
8
0.54%
CHS
8
0.54%
ANS/LDOX
8
0.54%
HCT
8
0.54%
CSE
8
0.54%
LAMT
7
0.47%
GES
7
0.47%
AACT
7
0.47%
CYP80B1
6
0.4%
8HGO
6
0.4%
PAL
6
0.4%
GGPPS
6
0.4%
TYDC_DDC
5
0.33%
CYP719
5
0.33%
ISY
5
0.33%
NCS
5
0.33%
CYP90D1
5
0.33%
SQS/FDFT1
5
0.33%
ADC
4
0.27%
SGD
4
0.27%
COR
4
0.27%
CCR
4
0.27%
CPR
4
0.27%
TAT
4
0.27%
SMO1/SMO2
4
0.27%
DWF5
4
0.27%
DXS
4
0.27%
MVK
4
0.27%
XMT_MXMT_DXMT
3
0.2%
TDC
3
0.2%
CCoAOMT
3
0.2%
HYD1
3
0.2%
DET2
3
0.2%
CYP51G1
3
0.2%
MCT/IspD
3
0.2%
MVD
3
0.2%
CMK/IspE
3
0.2%
FPPS
3
0.2%
CYP80F1
2
0.13%
UFGT
2
0.13%
CHI
2
0.13%
DFR
2
0.13%
DWF1
2
0.13%
FK
2
0.13%
SQE
2
0.13%
UGT
2
0.13%
MPO
1
0.07%
7DLH
1
0.07%
6OMT_4OMT_SOMT
1
0.07%
FLS
1
0.07%
HPPR
1
0.07%
CPI1
1
0.07%
HMGS
1
0.07%
HDS/IspG
1
0.07%
IDI
1
0.07%
DXR
1
0.07%
PMK
1
0.07%
HDR/IspH
1
0.07%
MDS/IspF
1
0.07%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 116 | 12 | POD (61) | View species results |
| Alkaloid pathway | 109 | 17 | T3O (28) | View species results |
| Terpenoid pathway | 109 | 18 | BAHD (49) | View species results |
| Flavonoid pathway | 41 | 9 | IFR (14) | View species results |
| Steroid pathway | 37 | 11 | CAS (16) | View species results |
| Rosmarinic acid pathway | 35 | 7 | C4H (12) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 744 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 91 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Plae1000000200 | Alkaloid | NMT | medium | borderline | NMT__00010__sp_A4GE70_DXMT1_COFCA |
| Plae1000000210 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| Plae1230001160 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| Plae1230001490 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| Plae1290002400 | Alkaloid | NMT | medium | borderline | NMT__00058__sp_Q9FZN8_TCS1_CAMSI |
| Plae150003620 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Plae150004490 | Alkaloid | NMT | medium | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| Plae3966980029930 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| Plae3979780033820 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Plae3989550038050 | Alkaloid | NMT | low | borderline | NMT__00021__sp_O64827_SUVR5_ARATH |
| Plae3991150038570 | Alkaloid | NMT | medium | pass | NMT__00061__sp_Q9SAH5_PLMT_ARATH |
| Plae4000630045810 | Alkaloid | NMT | medium | pass | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| Plae4000900046250 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Plae4001810048140 | Alkaloid | NMT | low | borderline | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| Plae4005000061900 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Plae4005230063830 | Alkaloid | NMT | low | borderline | NMT__00021__sp_O64827_SUVR5_ARATH |
| Plae4005490066010 | Alkaloid | NMT | low | borderline | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Plae4006010071250 | Alkaloid | NMT | medium | borderline | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| Plae4006330074540 | Alkaloid | NMT | low | borderline | NMT__00030__sp_Q43088_RBCMT_PEA |
| Plae4006360075650 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| Plae4006430077730 | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| Plae4006550078770 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Plae4006580080320 | Alkaloid | NMT | low | borderline | NMT__00021__sp_O64827_SUVR5_ARATH |
| Plae4007170091460 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Plae4007170092070 | Alkaloid | NMT | medium | borderline | NMT__00057__sp_Q9FR44_PEAM1_ARATH |
| Plae4007270094100 | Alkaloid | NMT | low | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Plae4007340097670 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| Plae4007870111910 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Plae4007910113920 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Plae4007930116270 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Plae4008000122270 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Plae4008020123010 | Alkaloid | NMT | low | borderline | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Plae4008450131660 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Plae4008530133790 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Plae4008530134150 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| Plae4008730140750 | Alkaloid | NMT | low | borderline | NMT__00020__sp_O23372_ATXR3_ARATH |
| Plae4008730141890 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| Plae4008770142790 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Plae4008770144550 | Alkaloid | NMT | low | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| Plae4008810145550 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Plae4009740158250 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| Plae4009740159120 | Alkaloid | NMT | low | borderline | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Plae4009740159170 | Alkaloid | NMT | low | borderline | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Plae4009860159980 | Alkaloid | NMT | medium | pass | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Plae4010390164220 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |