Phaeoceros laevis (phaeoceros_laevis)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Phenylpropanoid pathway 25.95% Alkaloid pathway 24.38% Terpenoid pathway 24.38% Flavonoid pathway 9.17% Steroid pathway 8.28% Rosmarinic acid pathway 7.83%

Family Distribution

447 Candidate Genes

C4H 10.31% C3'H/CYP98A 7.1% CYP76 5.56% BAHD 4.82% POD 4.42% 4CL 3.61% IFS 3.41% NMT 3.01%

Other Families 57.76%

More Families (92)

T3O 45 3.01% DWF4/CYP90B1 45 3.01% G8O/G8H 44 2.95% F3'5'H/CYP75A 35 2.34% F3'H/CYP75B 35 2.34% STR 32 2.14% IFR 28 1.87% F3H 26 1.74% TRI/TRII 24 1.61% GS 23 1.54% BR6OX2/CYP85A2 23 1.54% SMT1/SMT2/SMT3 19 1.27% H6H 18 1.2% CODM/T6ODM 18 1.2% CAS 17 1.14% T16H 16 1.07% SLS 15 1.0% CYP71 15 1.0% PYKS 14 0.94% FNS 14 0.94% COMT 14 0.94% CAD 14 0.94% IO 13 0.87% ROT3/CYP90C1 13 0.87% TPS 13 0.87% RAS 11 0.74% F5H/CYP84A 10 0.67% LAC 10 0.67% CPD/CYP90A1 10 0.67% 16OMT 9 0.6% ANR 9 0.6% BR6OX1/CYP85A1 9 0.6% CNMT 8 0.54% PMT 8 0.54% CHS 8 0.54% ANS/LDOX 8 0.54% HCT 8 0.54% CSE 8 0.54% LAMT 7 0.47% GES 7 0.47% AACT 7 0.47% CYP80B1 6 0.4% 8HGO 6 0.4% PAL 6 0.4% GGPPS 6 0.4% TYDC_DDC 5 0.33% CYP719 5 0.33% ISY 5 0.33% NCS 5 0.33% CYP90D1 5 0.33% SQS/FDFT1 5 0.33% ADC 4 0.27% SGD 4 0.27% COR 4 0.27% CCR 4 0.27% CPR 4 0.27% TAT 4 0.27% SMO1/SMO2 4 0.27% DWF5 4 0.27% DXS 4 0.27% MVK 4 0.27% XMT_MXMT_DXMT 3 0.2% TDC 3 0.2% CCoAOMT 3 0.2% HYD1 3 0.2% DET2 3 0.2% CYP51G1 3 0.2% MCT/IspD 3 0.2% MVD 3 0.2% CMK/IspE 3 0.2% FPPS 3 0.2% CYP80F1 2 0.13% UFGT 2 0.13% CHI 2 0.13% DFR 2 0.13% DWF1 2 0.13% FK 2 0.13% SQE 2 0.13% UGT 2 0.13% MPO 1 0.07% 7DLH 1 0.07% 6OMT_4OMT_SOMT 1 0.07% FLS 1 0.07% HPPR 1 0.07% CPI1 1 0.07% HMGS 1 0.07% HDS/IspG 1 0.07% IDI 1 0.07% DXR 1 0.07% PMK 1 0.07% HDR/IspH 1 0.07% MDS/IspF 1 0.07%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Phenylpropanoid pathway	116	12	POD (61)	View species results
Alkaloid pathway	109	17	T3O (28)	View species results
Terpenoid pathway	109	18	BAHD (49)	View species results
Flavonoid pathway	41	9	IFR (14)	View species results
Steroid pathway	37	11	CAS (16)	View species results
Rosmarinic acid pathway	35	7	C4H (12)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	744	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	91	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: TRI/TRII

Gene	Pathway	Family	Confidence	Status	Best Target
Plae2684400008140	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Plae3836680018810	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Plae3982300034410	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Plae3982300034420	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Plae4004850059320	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
Plae4004960060960	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
Plae4005230063740	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Plae4005230063990	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Plae4005290064660	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Plae4005860069030	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Plae4005860069040	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Plae4005860069050	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Plae4006580080370	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Plae4006980086680	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
Plae4006990086850	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
Plae4007440101360	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH
Plae4008590134690	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
Plae4008590135670	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH
Plae4008730139340	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH
Plae4008810145980	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
Plae4008940147030	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Plae4009270148910	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
Plae4009740158260	Alkaloid	TRI/TRII	low	borderline	TRI_TRII__00005__sp_P50162_TRN1_DATST
Plae4009740158830	Alkaloid	TRI/TRII	medium	pass	TRI_TRII__00005__sp_P50162_TRN1_DATST