Phaeoceros laevis (phaeoceros_laevis)
Imported from atlas release summary for Phaeoceros laevis.
447
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
447
Candidate Genes
C4H
10.31%
C3'H/CYP98A
7.1%
CYP76
5.56%
BAHD
4.82%
POD
4.42%
4CL
3.61%
IFS
3.41%
NMT
3.01%
Other Families
57.76%
More Families (92)
T3O
45
3.01%
DWF4/CYP90B1
45
3.01%
G8O/G8H
44
2.95%
F3'5'H/CYP75A
35
2.34%
F3'H/CYP75B
35
2.34%
STR
32
2.14%
IFR
28
1.87%
F3H
26
1.74%
TRI/TRII
24
1.61%
GS
23
1.54%
BR6OX2/CYP85A2
23
1.54%
SMT1/SMT2/SMT3
19
1.27%
H6H
18
1.2%
CODM/T6ODM
18
1.2%
CAS
17
1.14%
T16H
16
1.07%
SLS
15
1.0%
CYP71
15
1.0%
PYKS
14
0.94%
FNS
14
0.94%
COMT
14
0.94%
CAD
14
0.94%
IO
13
0.87%
ROT3/CYP90C1
13
0.87%
TPS
13
0.87%
RAS
11
0.74%
F5H/CYP84A
10
0.67%
LAC
10
0.67%
CPD/CYP90A1
10
0.67%
16OMT
9
0.6%
ANR
9
0.6%
BR6OX1/CYP85A1
9
0.6%
CNMT
8
0.54%
PMT
8
0.54%
CHS
8
0.54%
ANS/LDOX
8
0.54%
HCT
8
0.54%
CSE
8
0.54%
LAMT
7
0.47%
GES
7
0.47%
AACT
7
0.47%
CYP80B1
6
0.4%
8HGO
6
0.4%
PAL
6
0.4%
GGPPS
6
0.4%
TYDC_DDC
5
0.33%
CYP719
5
0.33%
ISY
5
0.33%
NCS
5
0.33%
CYP90D1
5
0.33%
SQS/FDFT1
5
0.33%
ADC
4
0.27%
SGD
4
0.27%
COR
4
0.27%
CCR
4
0.27%
CPR
4
0.27%
TAT
4
0.27%
SMO1/SMO2
4
0.27%
DWF5
4
0.27%
DXS
4
0.27%
MVK
4
0.27%
XMT_MXMT_DXMT
3
0.2%
TDC
3
0.2%
CCoAOMT
3
0.2%
HYD1
3
0.2%
DET2
3
0.2%
CYP51G1
3
0.2%
MCT/IspD
3
0.2%
MVD
3
0.2%
CMK/IspE
3
0.2%
FPPS
3
0.2%
CYP80F1
2
0.13%
UFGT
2
0.13%
CHI
2
0.13%
DFR
2
0.13%
DWF1
2
0.13%
FK
2
0.13%
SQE
2
0.13%
UGT
2
0.13%
MPO
1
0.07%
7DLH
1
0.07%
6OMT_4OMT_SOMT
1
0.07%
FLS
1
0.07%
HPPR
1
0.07%
CPI1
1
0.07%
HMGS
1
0.07%
HDS/IspG
1
0.07%
IDI
1
0.07%
DXR
1
0.07%
PMK
1
0.07%
HDR/IspH
1
0.07%
MDS/IspF
1
0.07%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 116 | 12 | POD (61) | View species results |
| Alkaloid pathway | 109 | 17 | T3O (28) | View species results |
| Terpenoid pathway | 109 | 18 | BAHD (49) | View species results |
| Flavonoid pathway | 41 | 9 | IFR (14) | View species results |
| Steroid pathway | 37 | 11 | CAS (16) | View species results |
| Rosmarinic acid pathway | 35 | 7 | C4H (12) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 744 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 91 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Plae4007330096320 | Phenylpropanoid | F5H/CYP84A | medium | borderline | F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH |
| Plae4007760109630 | Phenylpropanoid | F5H/CYP84A | medium | borderline | F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH |
| Plae4007930116370 | Phenylpropanoid | F5H/CYP84A | medium | borderline | F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH |
| Plae4008610138260 | Phenylpropanoid | F5H/CYP84A | medium | borderline | F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH |
| Plae4008730142380 | Phenylpropanoid | F5H/CYP84A | low | borderline | F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH |
| Plae150003810 | Phenylpropanoid | HCT | medium | pass | HCT__00002__sp_Q9FI78_HST_ARATH |
| Plae3960050028460 | Phenylpropanoid | HCT | medium | pass | HCT__00002__sp_Q9FI78_HST_ARATH |
| Plae4000420045430 | Phenylpropanoid | HCT | medium | pass | HCT__00001__sp_Q8GSM7_HST_TOBAC |
| Plae4000830045990 | Phenylpropanoid | HCT | low | borderline | HCT__00002__sp_Q9FI78_HST_ARATH |
| Plae4000830046000 | Phenylpropanoid | HCT | medium | pass | HCT__00001__sp_Q8GSM7_HST_TOBAC |
| Plae4004700057350 | Phenylpropanoid | HCT | medium | pass | HCT__00001__sp_Q8GSM7_HST_TOBAC |
| Plae4007440101590 | Phenylpropanoid | HCT | medium | pass | HCT__00001__sp_Q8GSM7_HST_TOBAC |
| Plae4008770144940 | Phenylpropanoid | HCT | low | borderline | HCT__00002__sp_Q9FI78_HST_ARATH |
| Plae3698610015520 | Phenylpropanoid | LAC | medium | pass | LAC__00004__sp_Q9LFD2_LAC8_ARATH |
| Plae3700360015740 | Phenylpropanoid | LAC | medium | pass | LAC__00001__sp_O80434_LAC4_ARATH |
| Plae3935180025020 | Phenylpropanoid | LAC | low | borderline | LAC__00004__sp_Q9LFD2_LAC8_ARATH |
| Plae3945980026380 | Phenylpropanoid | LAC | medium | pass | LAC__00004__sp_Q9LFD2_LAC8_ARATH |
| Plae4007930116420 | Phenylpropanoid | LAC | medium | pass | LAC__00001__sp_O80434_LAC4_ARATH |
| Plae4008450131080 | Phenylpropanoid | LAC | low | borderline | LAC__00001__sp_O80434_LAC4_ARATH |
| Plae4008680138920 | Phenylpropanoid | LAC | low | borderline | LAC__00001__sp_O80434_LAC4_ARATH |
| Plae4008680138940 | Phenylpropanoid | LAC | medium | pass | LAC__00002__sp_O81081_LAC2_ARATH |
| Plae4009270148970 | Phenylpropanoid | LAC | low | borderline | LAC__00001__sp_O80434_LAC4_ARATH |
| Plae4023870166760 | Phenylpropanoid | LAC | low | borderline | LAC__00001__sp_O80434_LAC4_ARATH |
| Plae4010230162610 | Phenylpropanoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Plae4010390166040 | Phenylpropanoid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| Plae1290002910 | Phenylpropanoid | POD | medium | pass | POD__00024__sp_Q9SCX8_PPA17_ARATH |
| Plae150004520 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Plae240007130 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| Plae2664990007710 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| Plae2684430008170 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Plae2702070008770 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Plae3904740022720 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Plae3904740022730 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Plae3931360023940 | Phenylpropanoid | POD | low | borderline | POD__00011__sp_Q05431_APX1_ARATH |
| Plae3935270025070 | Phenylpropanoid | POD | medium | pass | POD__00003__sp_A9PCL4_PRX2_POPTR |
| Plae3959500028230 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Plae3978070033270 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Plae3985250036200 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Plae3988610037370 | Phenylpropanoid | POD | medium | pass | POD__00020__sp_Q9FE01_APX2_ORYSJ |
| Plae3994200039810 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Plae3994470039900 | Phenylpropanoid | POD | medium | pass | POD__00023__sp_Q9M7T0_PRX2F_ARATH |
| Plae3999650044240 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Plae4002760050830 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Plae4003060051190 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Plae4004020054380 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Plae4005230063630 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Plae4005230063640 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Plae4005530066580 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Plae4005530066620 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Plae4005660067770 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |