Phaeoceros laevis (phaeoceros_laevis)
Imported from atlas release summary for Phaeoceros laevis.
745
Candidate Protein Records
447
Pathway-Level Records
1494
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1494
Family-Level Calls
C4H
10.31%
C3'H/CYP98A
7.1%
CYP76
5.56%
BAHD
4.82%
POD
4.42%
4CL
3.61%
IFS
3.41%
NMT
3.01%
Other Families
57.76%
More Families (92)
T3O
45
3.01%
DWF4/CYP90B1
45
3.01%
G8O/G8H
44
2.95%
F3'5'H/CYP75A
35
2.34%
F3'H/CYP75B
35
2.34%
STR
32
2.14%
IFR
28
1.87%
F3H
26
1.74%
TRI/TRII
24
1.61%
GS
23
1.54%
BR6OX2/CYP85A2
23
1.54%
SMT1/SMT2/SMT3
19
1.27%
H6H
18
1.2%
CODM/T6ODM
18
1.2%
CAS
17
1.14%
T16H
16
1.07%
SLS
15
1.0%
CYP71
15
1.0%
PYKS
14
0.94%
FNS
14
0.94%
COMT
14
0.94%
CAD
14
0.94%
IO
13
0.87%
ROT3/CYP90C1
13
0.87%
TPS
13
0.87%
RAS
11
0.74%
F5H/CYP84A
10
0.67%
LAC
10
0.67%
CPD/CYP90A1
10
0.67%
16OMT
9
0.6%
ANR
9
0.6%
BR6OX1/CYP85A1
9
0.6%
CNMT
8
0.54%
PMT
8
0.54%
CHS
8
0.54%
ANS/LDOX
8
0.54%
HCT
8
0.54%
CSE
8
0.54%
LAMT
7
0.47%
GES
7
0.47%
AACT
7
0.47%
CYP80B1
6
0.4%
8HGO
6
0.4%
PAL
6
0.4%
GGPPS
6
0.4%
TYDC_DDC
5
0.33%
CYP719
5
0.33%
ISY
5
0.33%
NCS
5
0.33%
CYP90D1
5
0.33%
SQS/FDFT1
5
0.33%
ADC
4
0.27%
SGD
4
0.27%
COR
4
0.27%
CCR
4
0.27%
CPR
4
0.27%
TAT
4
0.27%
SMO1/SMO2
4
0.27%
DWF5
4
0.27%
DXS
4
0.27%
MVK
4
0.27%
XMT_MXMT_DXMT
3
0.2%
TDC
3
0.2%
CCoAOMT
3
0.2%
HYD1
3
0.2%
DET2
3
0.2%
CYP51G1
3
0.2%
MCT/IspD
3
0.2%
MVD
3
0.2%
CMK/IspE
3
0.2%
FPPS
3
0.2%
CYP80F1
2
0.13%
UFGT
2
0.13%
CHI
2
0.13%
DFR
2
0.13%
DWF1
2
0.13%
FK
2
0.13%
SQE
2
0.13%
UGT
2
0.13%
MPO
1
0.07%
7DLH
1
0.07%
6OMT_4OMT_SOMT
1
0.07%
FLS
1
0.07%
HPPR
1
0.07%
CPI1
1
0.07%
HMGS
1
0.07%
HDS/IspG
1
0.07%
IDI
1
0.07%
DXR
1
0.07%
PMK
1
0.07%
HDR/IspH
1
0.07%
MDS/IspF
1
0.07%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 116 | 12 | POD (61) | View species results |
| Alkaloid pathway | 109 | 17 | T3O (28) | View species results |
| Terpenoid pathway | 109 | 18 | BAHD (49) | View species results |
| Flavonoid pathway | 41 | 9 | IFR (14) | View species results |
| Steroid pathway | 37 | 11 | CAS (16) | View species results |
| Rosmarinic acid pathway | 35 | 7 | C4H (12) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 744 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 91 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Plae4005930070400 | Alkaloid | XMT_MXMT_DXMT | low | borderline |