PlantSME Plant secondary metabolism enzyme database

Plagiochasma appendiculatum (plagiochasma_appendiculatum)

Imported from atlas release summary for Plagiochasma appendiculatum.

633
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 194 11 POD (115) View species results
Terpenoid pathway 146 18 BAHD (50) View species results
Alkaloid pathway 126 18 T3O (30) View species results
Flavonoid pathway 69 8 UFGT (25) View species results
Rosmarinic acid pathway 62 7 C4H (35) View species results
Steroid pathway 36 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 850 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
Pappscaffold_30046950 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pappscaffold_30049360 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pappscaffold_30052510 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pappscaffold_30054270 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pappscaffold_30064090 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pappscaffold_30065800 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pappscaffold_30066200 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pappscaffold_40089360 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pappscaffold_50094530 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Pappscaffold_50122330 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pappscaffold_50122360 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Pappscaffold_50123160 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pappscaffold_60129490 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pappscaffold_60131900 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pappscaffold_60133200 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pappscaffold_60151520 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pappscaffold_70158100 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Pappscaffold_80182350 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Pappscaffold_80202350 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pappscaffold_80204370 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pappscaffold_80204390 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pappscaffold_80204400 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pappscaffold_80204410 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pappscaffold_80204470 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pappscaffold_80204480 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Pappscaffold_80204530 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pappscaffold_80204540 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Pappscaffold_80204550 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL