PlantSME Plant secondary metabolism enzyme database

Plagiochasma appendiculatum (plagiochasma_appendiculatum)

Imported from atlas release summary for Plagiochasma appendiculatum.

633
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 194 11 POD (115) View species results
Terpenoid pathway 146 18 BAHD (50) View species results
Alkaloid pathway 126 18 T3O (30) View species results
Flavonoid pathway 69 8 UFGT (25) View species results
Rosmarinic acid pathway 62 7 C4H (35) View species results
Steroid pathway 36 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 850 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Pappscaffold_20021590 Flavonoid F3H medium pass
Pappscaffold_20029350 Flavonoid F3H low borderline
Pappscaffold_20034900 Flavonoid F3H medium borderline
Pappscaffold_20034920 Flavonoid F3H medium borderline
Pappscaffold_20039520 Flavonoid F3H low borderline
Pappscaffold_20039650 Flavonoid F3H low borderline
Pappscaffold_20045340 Flavonoid F3H medium borderline
Pappscaffold_30050280 Flavonoid F3H low borderline
Pappscaffold_30050300 Flavonoid F3H low borderline
Pappscaffold_30050320 Flavonoid F3H low borderline
Pappscaffold_30050330 Flavonoid F3H medium pass
Pappscaffold_30050340 Flavonoid F3H low borderline
Pappscaffold_30050350 Flavonoid F3H low borderline
Pappscaffold_30050360 Flavonoid F3H low borderline
Pappscaffold_30050370 Flavonoid F3H low borderline
Pappscaffold_30050390 Flavonoid F3H medium pass
Pappscaffold_30050400 Flavonoid F3H low borderline
Pappscaffold_30051430 Flavonoid F3H medium borderline
Pappscaffold_30066250 Flavonoid F3H medium borderline
Pappscaffold_40076230 Flavonoid F3H low borderline
Pappscaffold_40077260 Flavonoid F3H low borderline
Pappscaffold_40090280 Flavonoid F3H low borderline
Pappscaffold_40090290 Flavonoid F3H low borderline
Pappscaffold_50106370 Flavonoid F3H medium borderline
Pappscaffold_50109960 Flavonoid F3H medium borderline
Pappscaffold_50116010 Flavonoid F3H medium borderline
Pappscaffold_50120550 Flavonoid F3H medium borderline
Pappscaffold_50123460 Flavonoid F3H medium borderline
Pappscaffold_50125430 Flavonoid F3H low borderline
Pappscaffold_60142980 Flavonoid F3H medium borderline
Pappscaffold_60143130 Flavonoid F3H medium borderline
Pappscaffold_60143140 Flavonoid F3H medium borderline
Pappscaffold_60144520 Flavonoid F3H medium borderline
Pappscaffold_60144860 Flavonoid F3H medium borderline
Pappscaffold_60153760 Flavonoid F3H medium borderline
Pappscaffold_70155850 Flavonoid F3H medium borderline
Pappscaffold_70169260 Flavonoid F3H medium pass
Pappscaffold_70169270 Flavonoid F3H medium pass
Pappscaffold_70172770 Flavonoid F3H medium borderline
Pappscaffold_80199170 Flavonoid F3H medium borderline
Pappscaffold_80200180 Flavonoid F3H medium borderline
Pappscaffold_80202050 Flavonoid F3H medium borderline
Pappscaffold_80205270 Flavonoid F3H low borderline