PlantSME Plant secondary metabolism enzyme database

Plagiochasma appendiculatum (plagiochasma_appendiculatum)

Imported from atlas release summary for Plagiochasma appendiculatum.

633
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 194 11 POD (115) View species results
Terpenoid pathway 146 18 BAHD (50) View species results
Alkaloid pathway 126 18 T3O (30) View species results
Flavonoid pathway 69 8 UFGT (25) View species results
Rosmarinic acid pathway 62 7 C4H (35) View species results
Steroid pathway 36 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 850 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Pappscaffold_10016280 Flavonoid 4CL low borderline
Pappscaffold_20021940 Flavonoid 4CL medium borderline
Pappscaffold_20022760 Flavonoid 4CL low borderline
Pappscaffold_20022870 Flavonoid 4CL medium borderline
Pappscaffold_20023090 Flavonoid 4CL medium borderline
Pappscaffold_20041210 Flavonoid 4CL low borderline
Pappscaffold_30047180 Flavonoid 4CL low borderline
Pappscaffold_30048390 Flavonoid 4CL medium pass
Pappscaffold_30048400 Flavonoid 4CL medium pass
Pappscaffold_30059990 Flavonoid 4CL medium pass
Pappscaffold_40087110 Flavonoid 4CL medium pass
Pappscaffold_40087960 Flavonoid 4CL low borderline
Pappscaffold_50097100 Flavonoid 4CL medium pass
Pappscaffold_50110380 Flavonoid 4CL low borderline
Pappscaffold_50113550 Flavonoid 4CL medium pass
Pappscaffold_50115550 Flavonoid 4CL medium pass
Pappscaffold_50116460 Flavonoid 4CL medium pass
Pappscaffold_50117660 Flavonoid 4CL low borderline
Pappscaffold_50122870 Flavonoid 4CL medium pass
Pappscaffold_60142850 Flavonoid 4CL low borderline
Pappscaffold_70160090 Flavonoid 4CL low borderline
Pappscaffold_80202220 Flavonoid 4CL low borderline
Pappscaffold_10002510 Flavonoid ANR medium borderline
Pappscaffold_10002520 Flavonoid ANR medium borderline
Pappscaffold_10006160 Flavonoid ANR low borderline
Pappscaffold_20021990 Flavonoid ANR medium borderline
Pappscaffold_20022000 Flavonoid ANR medium borderline
Pappscaffold_20022130 Flavonoid ANR medium borderline
Pappscaffold_20022860 Flavonoid ANR low borderline
Pappscaffold_50101180 Flavonoid ANR low borderline
Pappscaffold_60141000 Flavonoid ANR medium borderline
Pappscaffold_60153140 Flavonoid ANR medium borderline
Pappscaffold_70174220 Flavonoid ANR medium borderline
Pappscaffold_80195420 Flavonoid ANR medium borderline
Pappscaffold_20039630 Flavonoid ANS/LDOX medium borderline
Pappscaffold_50107990 Flavonoid ANS/LDOX medium borderline
Pappscaffold_70175260 Flavonoid ANS/LDOX low borderline
Pappscaffold_80186550 Flavonoid ANS/LDOX medium borderline
Pappscaffold_80197570 Flavonoid ANS/LDOX medium borderline
Pappscaffold_30048640 Flavonoid C4H low borderline
Pappscaffold_30050900 Flavonoid C4H medium borderline
Pappscaffold_30051140 Flavonoid C4H low borderline
Pappscaffold_30066020 Flavonoid C4H medium borderline
Pappscaffold_70156330 Flavonoid C4H medium borderline
Pappscaffold_70160150 Flavonoid C4H low borderline
Pappscaffold_70178290 Flavonoid C4H medium borderline
Pappscaffold_10003420 Flavonoid CHI medium pass
Pappscaffold_30049040 Flavonoid CHI medium pass
Pappscaffold_30049130 Flavonoid CHI medium pass
Pappscaffold_80182460 Flavonoid CHI medium pass