PlantSME Plant secondary metabolism enzyme database

Plagiochasma appendiculatum (plagiochasma_appendiculatum)

Imported from atlas release summary for Plagiochasma appendiculatum.

633
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 194 11 POD (115) View species results
Terpenoid pathway 146 18 BAHD (50) View species results
Alkaloid pathway 126 18 T3O (30) View species results
Flavonoid pathway 69 8 UFGT (25) View species results
Rosmarinic acid pathway 62 7 C4H (35) View species results
Steroid pathway 36 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 850 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Gene Pathway Family Confidence Status
Pappscaffold_50120550 Flavonoid F3H medium borderline
Pappscaffold_50123460 Flavonoid F3H medium borderline
Pappscaffold_50125430 Flavonoid F3H low borderline
Pappscaffold_60142980 Flavonoid F3H medium borderline
Pappscaffold_60143130 Flavonoid F3H medium borderline
Pappscaffold_60143140 Flavonoid F3H medium borderline
Pappscaffold_60144520 Flavonoid F3H medium borderline
Pappscaffold_60144860 Flavonoid F3H medium borderline
Pappscaffold_60153760 Flavonoid F3H medium borderline
Pappscaffold_70155850 Flavonoid F3H medium borderline
Pappscaffold_70169260 Flavonoid F3H medium pass
Pappscaffold_70169270 Flavonoid F3H medium pass
Pappscaffold_70172770 Flavonoid F3H medium borderline
Pappscaffold_80199170 Flavonoid F3H medium borderline
Pappscaffold_80200180 Flavonoid F3H medium borderline
Pappscaffold_80202050 Flavonoid F3H medium borderline
Pappscaffold_80205270 Flavonoid F3H low borderline
Pappscaffold_20021440 Flavonoid FLS medium borderline
Pappscaffold_20021560 Flavonoid FLS medium borderline
Pappscaffold_20021570 Flavonoid FLS medium borderline
Pappscaffold_40076820 Flavonoid FNS medium borderline
Pappscaffold_40081030 Flavonoid FNS medium borderline
Pappscaffold_50104750 Flavonoid FNS medium borderline
Pappscaffold_50118000 Flavonoid FNS medium borderline
Pappscaffold_60129190 Flavonoid FNS low borderline
Pappscaffold_60132490 Flavonoid FNS low borderline
Pappscaffold_80192330 Flavonoid FNS medium borderline
Pappscaffold_10005220 Flavonoid IFR medium pass
Pappscaffold_10007100 Flavonoid IFR low borderline
Pappscaffold_10008060 Flavonoid IFR high pass
Pappscaffold_10015840 Flavonoid IFR low borderline
Pappscaffold_20026100 Flavonoid IFR low borderline
Pappscaffold_20043250 Flavonoid IFR low borderline
Pappscaffold_30054720 Flavonoid IFR low borderline
Pappscaffold_30069980 Flavonoid IFR medium pass
Pappscaffold_40075660 Flavonoid IFR low borderline
Pappscaffold_40090010 Flavonoid IFR high pass
Pappscaffold_50110250 Flavonoid IFR low borderline
Pappscaffold_50113860 Flavonoid IFR low borderline
Pappscaffold_50116020 Flavonoid IFR low borderline
Pappscaffold_50123560 Flavonoid IFR low borderline
Pappscaffold_60135540 Flavonoid IFR low borderline
Pappscaffold_60136180 Flavonoid IFR low borderline
Pappscaffold_60137200 Flavonoid IFR low borderline
Pappscaffold_60139650 Flavonoid IFR medium pass
Pappscaffold_60139660 Flavonoid IFR high pass
Pappscaffold_80191210 Flavonoid IFR low borderline
Pappscaffold_80194030 Flavonoid IFR low borderline
Pappscaffold_80195190 Flavonoid IFR low borderline
Pappscaffold_10000150 Flavonoid IFS low borderline