PlantSME Plant secondary metabolism enzyme database

Plagiochasma appendiculatum (plagiochasma_appendiculatum)

Imported from atlas release summary for Plagiochasma appendiculatum.

633
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 194 11 POD (115) View species results
Terpenoid pathway 146 18 BAHD (50) View species results
Alkaloid pathway 126 18 T3O (30) View species results
Flavonoid pathway 69 8 UFGT (25) View species results
Rosmarinic acid pathway 62 7 C4H (35) View species results
Steroid pathway 36 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 850 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Pappscaffold_80200170 Phenylpropanoid C3'H/CYP98A medium borderline
Pappscaffold_80201760 Phenylpropanoid C3'H/CYP98A medium borderline
Pappscaffold_80201990 Phenylpropanoid C3'H/CYP98A medium borderline
Pappscaffold_80202290 Phenylpropanoid C3'H/CYP98A medium pass
Pappscaffold_80203110 Phenylpropanoid C3'H/CYP98A medium borderline
Pappscaffold_80203340 Phenylpropanoid C3'H/CYP98A medium borderline
Pappscaffold_10000150 Phenylpropanoid C4H/CYP73A low borderline
Pappscaffold_10000760 Phenylpropanoid C4H/CYP73A low borderline
Pappscaffold_30048640 Phenylpropanoid C4H/CYP73A low borderline
Pappscaffold_30050900 Phenylpropanoid C4H/CYP73A medium borderline
Pappscaffold_30051140 Phenylpropanoid C4H/CYP73A low borderline
Pappscaffold_70160150 Phenylpropanoid C4H/CYP73A low borderline
Pappscaffold_80195040 Phenylpropanoid C4H/CYP73A medium borderline
Pappscaffold_80201870 Phenylpropanoid C4H/CYP73A low borderline
Pappscaffold_10002510 Phenylpropanoid CAD medium borderline
Pappscaffold_10002520 Phenylpropanoid CAD medium borderline
Pappscaffold_20021990 Phenylpropanoid CAD medium borderline
Pappscaffold_20022000 Phenylpropanoid CAD medium borderline
Pappscaffold_20022130 Phenylpropanoid CAD medium borderline
Pappscaffold_20042710 Phenylpropanoid CAD medium pass
Pappscaffold_20042720 Phenylpropanoid CAD medium pass
Pappscaffold_30047780 Phenylpropanoid CAD low borderline
Pappscaffold_30047790 Phenylpropanoid CAD low borderline
Pappscaffold_30058270 Phenylpropanoid CAD medium pass
Pappscaffold_40086370 Phenylpropanoid CAD low borderline
Pappscaffold_50095450 Phenylpropanoid CAD low borderline
Pappscaffold_50107000 Phenylpropanoid CAD low borderline
Pappscaffold_60135050 Phenylpropanoid CAD low borderline
Pappscaffold_60141000 Phenylpropanoid CAD medium borderline
Pappscaffold_70156090 Phenylpropanoid CAD medium pass
Pappscaffold_70156610 Phenylpropanoid CAD medium pass
Pappscaffold_70174220 Phenylpropanoid CAD medium borderline
Pappscaffold_70174230 Phenylpropanoid CAD medium borderline
Pappscaffold_70176470 Phenylpropanoid CAD low borderline
Pappscaffold_70179450 Phenylpropanoid CAD medium pass
Pappscaffold_70179460 Phenylpropanoid CAD medium pass
Pappscaffold_80190310 Phenylpropanoid CAD medium pass
Pappscaffold_80195420 Phenylpropanoid CAD medium borderline
Pappscaffold_10000610 Phenylpropanoid CCR medium borderline
Pappscaffold_10002490 Phenylpropanoid CCR low borderline
Pappscaffold_10006160 Phenylpropanoid CCR medium pass
Pappscaffold_10006170 Phenylpropanoid CCR medium borderline
Pappscaffold_30069980 Phenylpropanoid CCR low borderline
Pappscaffold_50120420 Phenylpropanoid CCR medium borderline
Pappscaffold_60151900 Phenylpropanoid CCR medium borderline
Pappscaffold_60153140 Phenylpropanoid CCR medium borderline
Pappscaffold_20020890 Phenylpropanoid CCoAOMT medium pass
Pappscaffold_20024640 Phenylpropanoid CCoAOMT low borderline
Pappscaffold_40079000 Phenylpropanoid CCoAOMT medium pass
Pappscaffold_10001520 Phenylpropanoid COMT low borderline