PlantSME Plant secondary metabolism enzyme database

Plagiochasma appendiculatum (plagiochasma_appendiculatum)

Imported from atlas release summary for Plagiochasma appendiculatum.

922
Candidate Protein Records
633
Pathway-Level Records
1882
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 194 11 POD (115) View species results
Terpenoid pathway 146 18 BAHD (50) View species results
Alkaloid pathway 126 18 T3O (30) View species results
Flavonoid pathway 69 8 UFGT (25) View species results
Rosmarinic acid pathway 62 7 C4H (35) View species results
Steroid pathway 36 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 850 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pappscaffold_20022300 Alkaloid T3O medium borderline
Pappscaffold_20023670 Alkaloid T3O medium pass
Pappscaffold_20024500 Alkaloid T3O medium pass
Pappscaffold_20025040 Alkaloid T3O medium borderline
Pappscaffold_20033090 Alkaloid T3O medium pass
Pappscaffold_20033640 Alkaloid T3O medium borderline
Pappscaffold_20035310 Alkaloid T3O medium pass
Pappscaffold_20040620 Alkaloid T3O medium borderline
Pappscaffold_20043160 Alkaloid T3O medium pass
Pappscaffold_30048520 Alkaloid T3O medium borderline
Pappscaffold_30048530 Alkaloid T3O medium borderline
Pappscaffold_30049970 Alkaloid T3O low borderline
Pappscaffold_30052030 Alkaloid T3O low borderline
Pappscaffold_30053650 Alkaloid T3O medium pass
Pappscaffold_30059250 Alkaloid T3O medium borderline
Pappscaffold_30059270 Alkaloid T3O medium borderline
Pappscaffold_30061800 Alkaloid T3O medium pass
Pappscaffold_30067960 Alkaloid T3O medium borderline
Pappscaffold_30069930 Alkaloid T3O medium pass
Pappscaffold_40073390 Alkaloid T3O medium pass
Pappscaffold_40073940 Alkaloid T3O low borderline
Pappscaffold_40079350 Alkaloid T3O medium pass
Pappscaffold_40085140 Alkaloid T3O medium borderline
Pappscaffold_40085370 Alkaloid T3O medium pass
Pappscaffold_40089230 Alkaloid T3O low borderline
Pappscaffold_40090420 Alkaloid T3O medium pass
Pappscaffold_40091290 Alkaloid T3O medium pass
Pappscaffold_40091300 Alkaloid T3O medium pass
Pappscaffold_40091460 Alkaloid T3O medium pass
Pappscaffold_40091510 Alkaloid T3O low borderline
Pappscaffold_50093860 Alkaloid T3O low borderline
Pappscaffold_50097410 Alkaloid T3O medium pass
Pappscaffold_50106330 Alkaloid T3O medium pass
Pappscaffold_50115520 Alkaloid T3O medium pass
Pappscaffold_50116070 Alkaloid T3O medium pass
Pappscaffold_50119130 Alkaloid T3O medium pass
Pappscaffold_50119140 Alkaloid T3O medium pass
Pappscaffold_50119180 Alkaloid T3O medium pass
Pappscaffold_50125630 Alkaloid T3O medium borderline
Pappscaffold_60135920 Alkaloid T3O medium borderline
Pappscaffold_60141940 Alkaloid T3O medium borderline
Pappscaffold_60150950 Alkaloid T3O medium borderline
Pappscaffold_60154660 Alkaloid T3O low borderline
Pappscaffold_70157830 Alkaloid T3O low borderline
Pappscaffold_70169540 Alkaloid T3O medium pass
Pappscaffold_70173290 Alkaloid T3O medium borderline
Pappscaffold_70180180 Alkaloid T3O low borderline
Pappscaffold_80181490 Alkaloid T3O medium borderline
Pappscaffold_80186130 Alkaloid T3O medium borderline
Pappscaffold_80187690 Alkaloid T3O medium borderline