PlantSME Plant secondary metabolism enzyme database

Platycodon grandiflorus (platycodon_grandiflorus)

Imported from atlas release summary for Platycodon grandiflorus.

2177
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 631 19 BAHD (233) View species results
Alkaloid pathway 483 20 7DLGT (90) View species results
Phenylpropanoid pathway 410 11 POD (153) View species results
Flavonoid pathway 308 12 UFGT (194) View species results
Rosmarinic acid pathway 207 7 C4H (67) View species results
Steroid pathway 138 13 CAS (64) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 351 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
PLgraScaffold11680019040.1 Alkaloid GS high pass
PLgraScaffold11680019060.1 Alkaloid GS high pass
PLgraScaffold13000032530.1 Alkaloid GS medium pass
PLgraScaffold13000032540.1 Alkaloid GS medium pass
PLgraScaffold14080042270.1 Alkaloid GS high pass
PLgraScaffold14290044040.1 Alkaloid GS high pass
PLgraScaffold2540128240.1 Alkaloid GS low borderline
PLgraScaffold2760140980.1 Alkaloid GS low borderline
PLgraScaffold32630168120.1 Alkaloid GS high pass
PLgraScaffold33000170490.1 Alkaloid GS high pass
PLgraScaffold35120180240.1 Alkaloid GS low borderline
PLgraScaffold39590199160.1 Alkaloid GS high pass
PLgraScaffold39590199180.1 Alkaloid GS high pass
PLgraScaffold4150209930.1 Alkaloid GS high pass
PLgraScaffold4150209940.1 Alkaloid GS high pass
PLgraScaffold43850233250.1 Alkaloid GS low borderline
PLgraScaffold44260242620.1 Alkaloid GS low borderline
PLgraScaffold44570249740.1 Alkaloid GS medium pass
PLgraScaffold44570249750.1 Alkaloid GS medium pass
PLgraScaffold44910258480.1 Alkaloid GS high pass
PLgraScaffold45430269410.1 Alkaloid GS low borderline
PLgraScaffold45470270290.1 Alkaloid GS medium pass
PLgraScaffold45470270300.1 Alkaloid GS medium pass
PLgraScaffold46670294120.1 Alkaloid GS low borderline
PLgraScaffold46690294440.1 Alkaloid GS low borderline
PLgraScaffold48900333110.1 Alkaloid GS high pass
PLgraScaffold5040338500.1 Alkaloid GS low borderline
PLgraScaffold5040338520.1 Alkaloid GS low borderline
PLgraScaffold510339210.1 Alkaloid GS low borderline
PLgraScaffold510339220.1 Alkaloid GS low borderline
PLgraScaffold510339230.1 Alkaloid GS low borderline
PLgraScaffold5370343240.1 Alkaloid GS medium pass
PLgraScaffold5370343250.1 Alkaloid GS medium pass
PLgraScaffold5520344910.1 Alkaloid GS low borderline
PLgraScaffold5870350320.1 Alkaloid GS low borderline
PLgraScaffold5870350330.1 Alkaloid GS low borderline
PLgraScaffold6500357440.1 Alkaloid GS high pass
PLgraScaffold680361630.1 Alkaloid GS low borderline
PLgraScaffold680361640.1 Alkaloid GS low borderline
PLgraScaffold6990363820.1 Alkaloid GS low borderline
PLgraScaffold7760373520.1 Alkaloid GS low borderline
PLgraScaffold8710385020.1 Alkaloid GS high pass
PLgraScaffold990399280.1 Alkaloid GS high pass
PLgraScaffold990399290.1 Alkaloid GS high pass
PLgraScaffold990399300.1 Alkaloid GS high pass
PLgraScaffold990399310.1 Alkaloid GS high pass
PLgraScaffold990399320.1 Alkaloid GS high pass
PLgraScaffold990399330.1 Alkaloid GS medium pass