PlantSME Plant secondary metabolism enzyme database

Platycodon grandiflorus (platycodon_grandiflorus)

Imported from atlas release summary for Platycodon grandiflorus.

2177
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 631 19 BAHD (233) View species results
Alkaloid pathway 483 20 7DLGT (90) View species results
Phenylpropanoid pathway 410 11 POD (153) View species results
Flavonoid pathway 308 12 UFGT (194) View species results
Rosmarinic acid pathway 207 7 C4H (67) View species results
Steroid pathway 138 13 CAS (64) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 351 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Gene Pathway Family Confidence Status
PLgraScaffold11300013840.1 Alkaloid TRI/TRII medium pass
PLgraScaffold11790019890.1 Alkaloid TRI/TRII medium pass
PLgraScaffold11790019900.1 Alkaloid TRI/TRII medium pass
PLgraScaffold13420035650.1 Alkaloid TRI/TRII low borderline
PLgraScaffold14820048730.1 Alkaloid TRI/TRII low borderline
PLgraScaffold15760056290.1 Alkaloid TRI/TRII medium pass
PLgraScaffold17310069890.1 Alkaloid TRI/TRII medium pass
PLgraScaffold17310069900.1 Alkaloid TRI/TRII medium pass
PLgraScaffold18680080350.1 Alkaloid TRI/TRII medium pass
PLgraScaffold18680080360.1 Alkaloid TRI/TRII medium pass
PLgraScaffold19190083870.1 Alkaloid TRI/TRII low borderline
PLgraScaffold19850089410.1 Alkaloid TRI/TRII low borderline
PLgraScaffold24050119220.1 Alkaloid TRI/TRII medium pass
PLgraScaffold24680124070.1 Alkaloid TRI/TRII medium pass
PLgraScaffold24680124080.1 Alkaloid TRI/TRII medium pass
PLgraScaffold24680124100.1 Alkaloid TRI/TRII medium pass
PLgraScaffold25750130470.1 Alkaloid TRI/TRII medium pass
PLgraScaffold2680137040.1 Alkaloid TRI/TRII low borderline
PLgraScaffold2680137040.2 Alkaloid TRI/TRII low borderline
PLgraScaffold2680137040.3 Alkaloid TRI/TRII low borderline
PLgraScaffold3060158180.1 Alkaloid TRI/TRII medium pass
PLgraScaffold34570177990.1 Alkaloid TRI/TRII medium pass
PLgraScaffold40990206550.1 Alkaloid TRI/TRII medium pass
PLgraScaffold40990206560.1 Alkaloid TRI/TRII medium pass
PLgraScaffold43630228460.1 Alkaloid TRI/TRII low borderline
PLgraScaffold43960235600.1 Alkaloid TRI/TRII medium pass
PLgraScaffold44080238610.1 Alkaloid TRI/TRII medium pass
PLgraScaffold44390245340.1 Alkaloid TRI/TRII medium pass
PLgraScaffold44390245350.1 Alkaloid TRI/TRII medium pass
PLgraScaffold44390245360.1 Alkaloid TRI/TRII medium pass
PLgraScaffold44390245370.1 Alkaloid TRI/TRII medium pass
PLgraScaffold44390245390.1 Alkaloid TRI/TRII medium pass
PLgraScaffold44390245400.1 Alkaloid TRI/TRII medium pass
PLgraScaffold44450246860.1 Alkaloid TRI/TRII medium pass
PLgraScaffold44460247310.1 Alkaloid TRI/TRII medium pass
PLgraScaffold44760254640.1 Alkaloid TRI/TRII medium pass
PLgraScaffold46180284410.1 Alkaloid TRI/TRII low borderline
PLgraScaffold46300287120.1 Alkaloid TRI/TRII medium pass
PLgraScaffold46440289860.1 Alkaloid TRI/TRII medium pass
PLgraScaffold46440289870.1 Alkaloid TRI/TRII medium pass
PLgraScaffold47330306000.1 Alkaloid TRI/TRII low borderline
PLgraScaffold48220322090.1 Alkaloid TRI/TRII low borderline
PLgraScaffold48460325890.1 Alkaloid TRI/TRII medium pass
PLgraScaffold48470326260.1 Alkaloid TRI/TRII medium pass
PLgraScaffold4960337170.1 Alkaloid TRI/TRII medium pass
PLgraScaffold5750348760.1 Alkaloid TRI/TRII low borderline
PLgraScaffold5750348770.1 Alkaloid TRI/TRII medium pass
PLgraScaffold6050352650.1 Alkaloid TRI/TRII medium pass
PLgraScaffold9370393740.1 Alkaloid TRI/TRII medium pass