Platycodon grandiflorus (platycodon_grandiflorus)
Imported from atlas release summary for Platycodon grandiflorus.
2177
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2177
Candidate Genes
C4H
6.53%
C3'H/CYP98A
5.71%
BAHD
5.55%
4CL
5.33%
UGT
4.57%
UFGT
4.03%
7DLGT
3.89%
IFS
3.54%
Other Families
60.86%
More Families (95)
CYP76
166
3.24%
POD
165
3.22%
T3O
149
2.91%
NMT
130
2.54%
DWF4/CYP90B1
116
2.27%
F3H
115
2.25%
STR
113
2.21%
F3'H/CYP75B
96
1.88%
CAD
78
1.52%
BR6OX2/CYP85A2
75
1.47%
CAS
74
1.45%
SMT1/SMT2/SMT3
73
1.43%
H6H
68
1.33%
CODM/T6ODM
65
1.27%
BBE
63
1.23%
CYP71
60
1.17%
SGD
59
1.15%
LAC
56
1.09%
TAT
54
1.06%
CSE
51
1.0%
7DLH
50
0.98%
TRI/TRII
49
0.96%
GS
48
0.94%
IFR
47
0.92%
HCT
46
0.9%
TPS
44
0.86%
T16H
43
0.84%
IO
41
0.8%
CYP90D1
40
0.78%
PAL
39
0.76%
GES
38
0.74%
FNS
38
0.74%
ANR
37
0.72%
SLS
36
0.7%
G8O/G8H
35
0.68%
COMT
33
0.64%
GGPPS
33
0.64%
PYKS
29
0.57%
F3'5'H/CYP75A
29
0.57%
COR
28
0.55%
CCR
28
0.55%
CPD/CYP90A1
26
0.51%
CYP51G1
26
0.51%
PMT
24
0.47%
8HGO
23
0.45%
16OMT
23
0.45%
F5H/CYP84A
23
0.45%
RAS
21
0.41%
NCS
20
0.39%
FPPS
20
0.39%
ANS/LDOX
18
0.35%
BR6OX1/CYP85A1
18
0.35%
CPR
17
0.33%
ROT3/CYP90C1
14
0.27%
DFR
13
0.25%
DXS
12
0.23%
LAMT
11
0.21%
HPPR
11
0.21%
MPO
10
0.2%
HMGR
9
0.18%
CNMT
8
0.16%
DET2
8
0.16%
ADC
7
0.14%
CYP719
7
0.14%
SQS/FDFT1
7
0.14%
SQE
7
0.14%
AACT
7
0.14%
ISY
6
0.12%
CHS
6
0.12%
CCoAOMT
6
0.12%
PMK
6
0.12%
CHI
5
0.1%
MVD
5
0.1%
HDS/IspG
5
0.1%
CYP80F1
4
0.08%
SMO1/SMO2
4
0.08%
MVK
4
0.08%
IDI
4
0.08%
TYDC_DDC
3
0.06%
CPI1
3
0.06%
DXR
3
0.06%
HDR/IspH
3
0.06%
CMK/IspE
3
0.06%
XMT_MXMT_DXMT
2
0.04%
TDC
2
0.04%
DWF7
2
0.04%
MCT/IspD
2
0.04%
MDS/IspF
2
0.04%
HMGS
2
0.04%
CYP80B1
1
0.02%
FLS
1
0.02%
DWF1
1
0.02%
HYD1
1
0.02%
FK
1
0.02%
DWF5
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 631 | 19 | BAHD (233) | View species results |
| Alkaloid pathway | 483 | 20 | 7DLGT (90) | View species results |
| Phenylpropanoid pathway | 410 | 11 | POD (153) | View species results |
| Flavonoid pathway | 308 | 12 | UFGT (194) | View species results |
| Rosmarinic acid pathway | 207 | 7 | C4H (67) | View species results |
| Steroid pathway | 138 | 13 | CAS (64) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1862 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 351 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| PLgraScaffold100000560.1 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| PLgraScaffold10310003880.1 | Alkaloid | NMT | low | borderline | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| PLgraScaffold1100010770.1 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| PLgraScaffold11540017570.1 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| PLgraScaffold11540017580.1 | Alkaloid | NMT | medium | pass | NMT__00015__sp_C8YTM5_PEAM2_WHEAT |
| PLgraScaffold11540017580.2 | Alkaloid | NMT | medium | pass | NMT__00057__sp_Q9FR44_PEAM1_ARATH |
| PLgraScaffold11540017580.3 | Alkaloid | NMT | low | borderline | NMT__00015__sp_C8YTM5_PEAM2_WHEAT |
| PLgraScaffold11910021040.1 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| PLgraScaffold11910021040.2 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| PLgraScaffold14820048390.1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| PLgraScaffold14830048860.1 | Alkaloid | NMT | low | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| PLgraScaffold15300052910.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| PLgraScaffold15570054750.1 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| PLgraScaffold15910057580.1 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| PLgraScaffold1600058290.1 | Alkaloid | NMT | medium | pass | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| PLgraScaffold16770064930.1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| PLgraScaffold16930066310.1 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| PLgraScaffold16930066310.2 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| PLgraScaffold18000075100.1 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| PLgraScaffold18090075750.1 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| PLgraScaffold18090075750.2 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| PLgraScaffold1820076500.1 | Alkaloid | NMT | low | borderline | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| PLgraScaffold18360077560.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| PLgraScaffold18360077560.2 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| PLgraScaffold18360077560.3 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| PLgraScaffold18360077560.4 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| PLgraScaffold18720080960.1 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| PLgraScaffold18720080960.2 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| PLgraScaffold190082730.1 | Alkaloid | NMT | low | borderline | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| PLgraScaffold19190084010.1 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| PLgraScaffold19190084020.1 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| PLgraScaffold19450086280.1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| PLgraScaffold19570087570.1 | Alkaloid | NMT | medium | pass | NMT__00061__sp_Q9SAH5_PLMT_ARATH |
| PLgraScaffold19720088780.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| PLgraScaffold20040091280.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| PLgraScaffold20730095630.1 | Alkaloid | NMT | medium | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| PLgraScaffold2080096210.1 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| PLgraScaffold22170105850.1 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| PLgraScaffold2250108440.1 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| PLgraScaffold22750110540.1 | Alkaloid | NMT | medium | pass | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| PLgraScaffold22750110540.2 | Alkaloid | NMT | medium | pass | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| PLgraScaffold24050119370.1 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| PLgraScaffold24580123200.1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| PLgraScaffold26110133060.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| PLgraScaffold2670136040.1 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| PLgraScaffold2690137530.1 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| PLgraScaffold27760141800.1 | Alkaloid | NMT | low | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| PLgraScaffold27960142610.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| PLgraScaffold27960142610.2 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| PLgraScaffold27960142610.3 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |