PlantSME Plant secondary metabolism enzyme database

Platycodon grandiflorus (platycodon_grandiflorus)

Imported from atlas release summary for Platycodon grandiflorus.

2177
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 631 19 BAHD (233) View species results
Alkaloid pathway 483 20 7DLGT (90) View species results
Phenylpropanoid pathway 410 11 POD (153) View species results
Flavonoid pathway 308 12 UFGT (194) View species results
Rosmarinic acid pathway 207 7 C4H (67) View species results
Steroid pathway 138 13 CAS (64) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 351 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
PLgraScaffold10160001840.1 Alkaloid T3O medium borderline
PLgraScaffold10160001850.1 Alkaloid T3O medium borderline
PLgraScaffold10530005870.1 Alkaloid T3O medium pass
PLgraScaffold1120012520.1 Alkaloid T3O medium borderline
PLgraScaffold1120012530.1 Alkaloid T3O medium borderline
PLgraScaffold12250024850.1 Alkaloid T3O medium borderline
PLgraScaffold12480026680.1 Alkaloid T3O medium borderline
PLgraScaffold12800030120.1 Alkaloid T3O medium borderline
PLgraScaffold13610037170.1 Alkaloid T3O medium pass
PLgraScaffold140041460.1 Alkaloid T3O medium borderline
PLgraScaffold14110043090.1 Alkaloid T3O medium borderline
PLgraScaffold14110043100.1 Alkaloid T3O medium borderline
PLgraScaffold14160043330.1 Alkaloid T3O medium borderline
PLgraScaffold1520052090.1 Alkaloid T3O medium pass
PLgraScaffold15980057930.1 Alkaloid T3O medium borderline
PLgraScaffold16500062850.1 Alkaloid T3O medium pass
PLgraScaffold16540062970.1 Alkaloid T3O medium borderline
PLgraScaffold16740064650.1 Alkaloid T3O medium borderline
PLgraScaffold16810065150.1 Alkaloid T3O medium pass
PLgraScaffold16900066110.1 Alkaloid T3O medium pass
PLgraScaffold17000067160.1 Alkaloid T3O medium borderline
PLgraScaffold17070067520.1 Alkaloid T3O medium borderline
PLgraScaffold17420070480.1 Alkaloid T3O medium pass
PLgraScaffold17760072930.1 Alkaloid T3O medium pass
PLgraScaffold18200076650.1 Alkaloid T3O medium borderline
PLgraScaffold18710080740.1 Alkaloid T3O medium pass
PLgraScaffold1880081310.1 Alkaloid T3O medium borderline
PLgraScaffold19560087260.1 Alkaloid T3O medium borderline
PLgraScaffold19910089680.1 Alkaloid T3O medium borderline
PLgraScaffold20090680.1 Alkaloid T3O low borderline
PLgraScaffold2090096590.1 Alkaloid T3O medium pass
PLgraScaffold220104470.1 Alkaloid T3O medium borderline
PLgraScaffold220104490.1 Alkaloid T3O medium borderline
PLgraScaffold22070105290.1 Alkaloid T3O medium pass
PLgraScaffold22630109730.1 Alkaloid T3O medium pass
PLgraScaffold22630109740.1 Alkaloid T3O medium pass
PLgraScaffold23100113120.1 Alkaloid T3O medium borderline
PLgraScaffold23100113130.1 Alkaloid T3O medium borderline
PLgraScaffold23100113160.1 Alkaloid T3O medium borderline
PLgraScaffold23150113860.1 Alkaloid T3O medium borderline
PLgraScaffold23340115270.1 Alkaloid T3O medium borderline
PLgraScaffold23770117710.1 Alkaloid T3O medium borderline
PLgraScaffold24340121650.1 Alkaloid T3O medium pass
PLgraScaffold24530122740.1 Alkaloid T3O medium pass
PLgraScaffold24530122760.1 Alkaloid T3O low borderline
PLgraScaffold2500126460.1 Alkaloid T3O medium borderline
PLgraScaffold2500126480.1 Alkaloid T3O medium borderline
PLgraScaffold25500129420.1 Alkaloid T3O medium pass
PLgraScaffold25500129430.1 Alkaloid T3O medium pass
PLgraScaffold26520135020.1 Alkaloid T3O medium pass