PlantSME Plant secondary metabolism enzyme database

Platycodon grandiflorus (platycodon_grandiflorus)

Imported from atlas release summary for Platycodon grandiflorus.

2177
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 631 19 BAHD (233) View species results
Alkaloid pathway 483 20 7DLGT (90) View species results
Phenylpropanoid pathway 410 11 POD (153) View species results
Flavonoid pathway 308 12 UFGT (194) View species results
Rosmarinic acid pathway 207 7 C4H (67) View species results
Steroid pathway 138 13 CAS (64) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 351 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
Reset
Gene Pathway Family Confidence Status Best Target
PLgraScaffold48460325830.1 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
PLgraScaffold48480326360.1 Alkaloid NMT low borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
PLgraScaffold48820331920.1 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
PLgraScaffold48820331920.2 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
PLgraScaffold48820331920.3 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
PLgraScaffold48820331920.4 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
PLgraScaffold48930333370.1 Alkaloid NMT low borderline NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
PLgraScaffold48970334170.1 Alkaloid NMT low borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
PLgraScaffold5200340870.1 Alkaloid NMT medium borderline NMT__00018__sp_I1M2U5_NAMT1_SOYBN
PLgraScaffold5290341770.1 Alkaloid NMT low borderline NMT__00040__sp_Q84WW6_ASHH1_ARATH
PLgraScaffold5290341770.2 Alkaloid NMT low borderline NMT__00040__sp_Q84WW6_ASHH1_ARATH
PLgraScaffold5750348580.1 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
PLgraScaffold6230354370.1 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
PLgraScaffold630354920.1 Alkaloid NMT low borderline NMT__00060__sp_Q9MAT5_ANM10_ARATH
PLgraScaffold6350355640.1 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
PLgraScaffold6470357010.1 Alkaloid NMT medium borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
PLgraScaffold6660359340.1 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
PLgraScaffold6760360400.1 Alkaloid NMT medium borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
PLgraScaffold7240367440.1 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
PLgraScaffold7240367470.1 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
PLgraScaffold7910375640.1 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
PLgraScaffold7970376050.1 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
PLgraScaffold7970376050.2 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
PLgraScaffold8130378540.1 Alkaloid NMT medium borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
PLgraScaffold8130378540.2 Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH
PLgraScaffold8130378540.3 Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH
PLgraScaffold8130378540.4 Alkaloid NMT medium borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
PLgraScaffold8300380730.1 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
PLgraScaffold860383580.1 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
PLgraScaffold9470394740.1 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB