PlantSME Plant secondary metabolism enzyme database

Platycodon grandiflorus (platycodon_grandiflorus)

Imported from atlas release summary for Platycodon grandiflorus.

2177
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 631 19 BAHD (233) View species results
Alkaloid pathway 483 20 7DLGT (90) View species results
Phenylpropanoid pathway 410 11 POD (153) View species results
Flavonoid pathway 308 12 UFGT (194) View species results
Rosmarinic acid pathway 207 7 C4H (67) View species results
Steroid pathway 138 13 CAS (64) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 351 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
PLgraScaffold27000138170.1 Alkaloid T3O medium pass
PLgraScaffold29610152100.1 Alkaloid T3O low borderline
PLgraScaffold29870153540.1 Alkaloid T3O low borderline
PLgraScaffold31180160770.1 Alkaloid T3O medium pass
PLgraScaffold31710163490.1 Alkaloid T3O medium pass
PLgraScaffold31710163490.2 Alkaloid T3O medium pass
PLgraScaffold32690168350.1 Alkaloid T3O medium borderline
PLgraScaffold33000170280.1 Alkaloid T3O medium borderline
PLgraScaffold33000170300.1 Alkaloid T3O medium borderline
PLgraScaffold3300170010.1 Alkaloid T3O medium borderline
PLgraScaffold33780173730.1 Alkaloid T3O medium borderline
PLgraScaffold34890179110.1 Alkaloid T3O medium pass
PLgraScaffold35670183330.1 Alkaloid T3O medium borderline
PLgraScaffold35670183330.2 Alkaloid T3O medium borderline
PLgraScaffold35670183340.1 Alkaloid T3O medium borderline
PLgraScaffold36110185730.1 Alkaloid T3O medium borderline
PLgraScaffold3670188130.1 Alkaloid T3O medium pass
PLgraScaffold37120189960.1 Alkaloid T3O low borderline
PLgraScaffold38310194090.1 Alkaloid T3O medium borderline
PLgraScaffold39070196870.1 Alkaloid T3O medium pass
PLgraScaffold39070196880.1 Alkaloid T3O medium pass
PLgraScaffold3940197930.1 Alkaloid T3O medium pass
PLgraScaffold3980200480.1 Alkaloid T3O medium borderline
PLgraScaffold3980200490.1 Alkaloid T3O medium borderline
PLgraScaffold41490209860.1 Alkaloid T3O medium borderline
PLgraScaffold41760211470.1 Alkaloid T3O medium borderline
PLgraScaffold41760211500.1 Alkaloid T3O medium borderline
PLgraScaffold41910212160.1 Alkaloid T3O medium borderline
PLgraScaffold42720217910.1 Alkaloid T3O medium pass
PLgraScaffold42950219880.1 Alkaloid T3O medium borderline
PLgraScaffold43560226670.1 Alkaloid T3O medium borderline
PLgraScaffold4370230150.1 Alkaloid T3O medium pass
PLgraScaffold43980236130.1 Alkaloid T3O medium pass
PLgraScaffold44040237680.1 Alkaloid T3O medium borderline
PLgraScaffold44200241630.1 Alkaloid T3O medium pass
PLgraScaffold44260242630.1 Alkaloid T3O medium pass
PLgraScaffold44310243600.1 Alkaloid T3O medium borderline
PLgraScaffold4450248080.1 Alkaloid T3O medium pass
PLgraScaffold44550249520.1 Alkaloid T3O medium borderline
PLgraScaffold44710253470.1 Alkaloid T3O medium borderline
PLgraScaffold44980259870.1 Alkaloid T3O medium pass
PLgraScaffold44980259880.1 Alkaloid T3O medium pass
PLgraScaffold45100263000.1 Alkaloid T3O medium borderline
PLgraScaffold45100263010.1 Alkaloid T3O medium borderline
PLgraScaffold45310267040.1 Alkaloid T3O medium pass
PLgraScaffold45700274640.1 Alkaloid T3O medium borderline
PLgraScaffold45750275600.1 Alkaloid T3O medium borderline
PLgraScaffold45840277760.1 Alkaloid T3O low borderline
PLgraScaffold46200285210.1 Alkaloid T3O medium pass
PLgraScaffold46350288240.1 Alkaloid T3O medium pass