Platycodon grandiflorus (platycodon_grandiflorus)
Imported from atlas release summary for Platycodon grandiflorus.
2519
Candidate Protein Records
2177
Pathway-Level Records
5118
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
5118
Family-Level Calls
C4H
6.53%
C3'H/CYP98A
5.71%
BAHD
5.55%
4CL
5.33%
UGT
4.57%
UFGT
4.03%
7DLGT
3.89%
IFS
3.54%
Other Families
60.86%
More Families (95)
CYP76
166
3.24%
POD
165
3.22%
T3O
149
2.91%
NMT
130
2.54%
DWF4/CYP90B1
116
2.27%
F3H
115
2.25%
STR
113
2.21%
F3'H/CYP75B
96
1.88%
CAD
78
1.52%
BR6OX2/CYP85A2
75
1.47%
CAS
74
1.45%
SMT1/SMT2/SMT3
73
1.43%
H6H
68
1.33%
CODM/T6ODM
65
1.27%
BBE
63
1.23%
CYP71
60
1.17%
SGD
59
1.15%
LAC
56
1.09%
TAT
54
1.06%
CSE
51
1.0%
7DLH
50
0.98%
TRI/TRII
49
0.96%
GS
48
0.94%
IFR
47
0.92%
HCT
46
0.9%
TPS
44
0.86%
T16H
43
0.84%
IO
41
0.8%
CYP90D1
40
0.78%
PAL
39
0.76%
GES
38
0.74%
FNS
38
0.74%
ANR
37
0.72%
SLS
36
0.7%
G8O/G8H
35
0.68%
COMT
33
0.64%
GGPPS
33
0.64%
PYKS
29
0.57%
F3'5'H/CYP75A
29
0.57%
COR
28
0.55%
CCR
28
0.55%
CPD/CYP90A1
26
0.51%
CYP51G1
26
0.51%
PMT
24
0.47%
8HGO
23
0.45%
16OMT
23
0.45%
F5H/CYP84A
23
0.45%
RAS
21
0.41%
NCS
20
0.39%
FPPS
20
0.39%
ANS/LDOX
18
0.35%
BR6OX1/CYP85A1
18
0.35%
CPR
17
0.33%
ROT3/CYP90C1
14
0.27%
DFR
13
0.25%
DXS
12
0.23%
LAMT
11
0.21%
HPPR
11
0.21%
MPO
10
0.2%
HMGR
9
0.18%
CNMT
8
0.16%
DET2
8
0.16%
ADC
7
0.14%
CYP719
7
0.14%
SQS/FDFT1
7
0.14%
SQE
7
0.14%
AACT
7
0.14%
ISY
6
0.12%
CHS
6
0.12%
CCoAOMT
6
0.12%
PMK
6
0.12%
CHI
5
0.1%
MVD
5
0.1%
HDS/IspG
5
0.1%
CYP80F1
4
0.08%
SMO1/SMO2
4
0.08%
MVK
4
0.08%
IDI
4
0.08%
TYDC_DDC
3
0.06%
CPI1
3
0.06%
DXR
3
0.06%
HDR/IspH
3
0.06%
CMK/IspE
3
0.06%
XMT_MXMT_DXMT
2
0.04%
TDC
2
0.04%
DWF7
2
0.04%
MCT/IspD
2
0.04%
MDS/IspF
2
0.04%
HMGS
2
0.04%
CYP80B1
1
0.02%
FLS
1
0.02%
DWF1
1
0.02%
HYD1
1
0.02%
FK
1
0.02%
DWF5
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 631 | 19 | BAHD (233) | View species results |
| Alkaloid pathway | 483 | 20 | 7DLGT (90) | View species results |
| Phenylpropanoid pathway | 410 | 11 | POD (153) | View species results |
| Flavonoid pathway | 308 | 12 | UFGT (194) | View species results |
| Rosmarinic acid pathway | 207 | 7 | C4H (67) | View species results |
| Steroid pathway | 138 | 13 | CAS (64) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1862 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 351 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| PLgraScaffold1600058150.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold1600058160.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold1600058170.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold16310061040.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold16310061050.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold16310061060.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold16310061070.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold16310061070.2 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold20090091470.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold20090091480.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold21940103710.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold2200104610.1 | Alkaloid | SLS | low | borderline |
| PLgraScaffold23090112890.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold2820144220.2 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold30410156980.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold32250166490.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold34740178520.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold41070207010.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold44050238150.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold45140263790.2 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold4730305480.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold48290323190.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold48290323200.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold5500344790.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold5520345140.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold7220367230.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold7220367230.2 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold8000376870.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold8600383820.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold8600383820.2 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold8600383830.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold9080390240.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold9080390250.1 | Alkaloid | SLS | medium | borderline |
| PLgraScaffold1020002600.1 | Alkaloid | STR | medium | pass |
| PLgraScaffold10530005800.1 | Alkaloid | STR | medium | pass |
| PLgraScaffold10860009370.1 | Alkaloid | STR | low | borderline |
| PLgraScaffold10860009370.2 | Alkaloid | STR | low | borderline |
| PLgraScaffold10860009370.5 | Alkaloid | STR | low | borderline |
| PLgraScaffold10860009370.6 | Alkaloid | STR | low | borderline |
| PLgraScaffold11210012880.1 | Alkaloid | STR | medium | pass |
| PLgraScaffold11720019450.1 | Alkaloid | STR | low | borderline |
| PLgraScaffold11720019450.3 | Alkaloid | STR | low | borderline |
| PLgraScaffold11720019460.1 | Alkaloid | STR | low | borderline |
| PLgraScaffold11720019460.2 | Alkaloid | STR | low | borderline |
| PLgraScaffold11720019460.3 | Alkaloid | STR | low | borderline |
| PLgraScaffold11940021550.1 | Alkaloid | STR | medium | pass |
| PLgraScaffold12410026040.1 | Alkaloid | STR | low | borderline |
| PLgraScaffold12410026050.1 | Alkaloid | STR | low | borderline |
| PLgraScaffold12930031560.1 | Alkaloid | STR | low | borderline |
| PLgraScaffold14380044740.1 | Alkaloid | STR | low | borderline |