Ricciocarpus natans (ricciocarpus_natans)
Imported from atlas release summary for Ricciocarpus natans.
578
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
578
Candidate Genes
POD
8.98%
C4H
6.76%
BAHD
6.03%
C3'H/CYP98A
5.43%
4CL
5.02%
CYP76
3.82%
NMT
3.48%
STR
2.68%
Other Families
57.8%
More Families (95)
T3O
40
2.68%
IFS
39
2.61%
DWF4/CYP90B1
33
2.21%
TRI/TRII
30
2.01%
BR6OX2/CYP85A2
30
2.01%
F3H
27
1.81%
PAL
24
1.61%
IFR
24
1.61%
PYKS
23
1.54%
F3'H/CYP75B
22
1.47%
CSE
21
1.41%
SMT1/SMT2/SMT3
21
1.41%
UGT
21
1.41%
GS
20
1.34%
7DLGT
20
1.34%
CAD
20
1.34%
UFGT
19
1.27%
LAMT
18
1.21%
HCT
18
1.21%
CHS
17
1.14%
H6H
16
1.07%
F3'5'H/CYP75A
16
1.07%
RAS
15
1.0%
IO
14
0.94%
CAS
12
0.8%
CYP71
12
0.8%
CODM/T6ODM
11
0.74%
G8O/G8H
11
0.74%
ANR
11
0.74%
T16H
10
0.67%
SLS
9
0.6%
COMT
9
0.6%
TPS
9
0.6%
CNMT
8
0.54%
FNS
8
0.54%
LAC
8
0.54%
TDC
7
0.47%
COR
7
0.47%
BR6OX1/CYP85A1
7
0.47%
GGPPS
7
0.47%
AACT
7
0.47%
CYP719
6
0.4%
TYDC_DDC
6
0.4%
DFR
6
0.4%
CPR
6
0.4%
TAT
6
0.4%
CYP90D1
6
0.4%
CPD/CYP90A1
6
0.4%
NCS
5
0.33%
8HGO
5
0.33%
F5H/CYP84A
5
0.33%
ROT3/CYP90C1
5
0.33%
DET2
5
0.33%
FPPS
5
0.33%
6OMT_4OMT_SOMT
4
0.27%
PMT
4
0.27%
SGD
4
0.27%
ANS/LDOX
4
0.27%
CCR
4
0.27%
CYP51G1
4
0.27%
SQS/FDFT1
4
0.27%
CYP80B1
3
0.2%
GES
3
0.2%
ISY
3
0.2%
BBE
3
0.2%
ODC
3
0.2%
CHI
3
0.2%
SMO1/SMO2
3
0.2%
MVK
3
0.2%
HMGS
3
0.2%
MVD
3
0.2%
CYP80F1
2
0.13%
XMT_MXMT_DXMT
2
0.13%
7DLH
2
0.13%
MPO
2
0.13%
DWF5
2
0.13%
SQE
2
0.13%
DWF1
2
0.13%
MCT/IspD
2
0.13%
ADC
1
0.07%
CCoAOMT
1
0.07%
HPPR
1
0.07%
DWF7
1
0.07%
HYD1
1
0.07%
FK
1
0.07%
CPI1
1
0.07%
IDI
1
0.07%
DXS
1
0.07%
HMGR
1
0.07%
DXR
1
0.07%
PMK
1
0.07%
HDR/IspH
1
0.07%
HDS/IspG
1
0.07%
CMK/IspE
1
0.07%
MDS/IspF
1
0.07%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 183 | 9 | POD (119) | View species results |
| Terpenoid pathway | 129 | 19 | BAHD (61) | View species results |
| Alkaloid pathway | 120 | 19 | TRI/TRII (23) | View species results |
| Flavonoid pathway | 59 | 7 | CHS (17) | View species results |
| Rosmarinic acid pathway | 54 | 7 | C4H (23) | View species results |
| Steroid pathway | 33 | 13 | CAS (10) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 521 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 123 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Rnatscaffold_40110000 | Terpenoid | BAHD | low | borderline | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| Rnatscaffold_420115000 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Rnatscaffold_50120460 | Terpenoid | BAHD | low | borderline | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Rnatscaffold_50120470 | Terpenoid | BAHD | low | borderline | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Rnatscaffold_50120490 | Terpenoid | BAHD | low | borderline | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Rnatscaffold_50123160 | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| Rnatscaffold_50126490 | Terpenoid | BAHD | medium | pass | BAHD__00093__sp_Q9SV07_ASAT1_ARATH |
| Rnatscaffold_50133760 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Rnatscaffold_50134270 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Rnatscaffold_50134540 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Rnatscaffold_50134550 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Rnatscaffold_50137690 | Terpenoid | BAHD | medium | pass | BAHD__00034__sp_P10349_GPAT2_CUCMO |
| Rnatscaffold_510139970 | Terpenoid | BAHD | medium | pass | BAHD__00023__sp_O22975_LPAAT_ARATH |
| Rnatscaffold_510140920 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Rnatscaffold_510141090 | Terpenoid | BAHD | medium | pass | BAHD__00065__sp_Q94C49_ZDH18_ARATH |
| Rnatscaffold_570148560 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Rnatscaffold_570149640 | Terpenoid | BAHD | low | borderline | BAHD__00013__sp_B3DN87_ZDH12_ARATH |
| Rnatscaffold_60153310 | Terpenoid | BAHD | medium | pass | BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE |
| Rnatscaffold_60154640 | Terpenoid | BAHD | medium | pass | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| Rnatscaffold_60156850 | Terpenoid | BAHD | medium | pass | BAHD__00085__sp_Q9M1K5_ZDH13_ARATH |
| Rnatscaffold_60159570 | Terpenoid | BAHD | medium | pass | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| Rnatscaffold_60161400 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| Rnatscaffold_70168830 | Terpenoid | BAHD | low | borderline | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| Rnatscaffold_70173290 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Rnatscaffold_70174850 | Terpenoid | BAHD | medium | pass | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| Rnatscaffold_70176540 | Terpenoid | BAHD | medium | pass | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| Rnatscaffold_70177430 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Rnatscaffold_70177520 | Terpenoid | BAHD | low | borderline | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| Rnatscaffold_70178630 | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| Rnatscaffold_70182190 | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| Rnatscaffold_80185320 | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| Rnatscaffold_80186050 | Terpenoid | BAHD | low | borderline | BAHD__00002__sp_A0A068BIF1_AT9_ACTER |
| Rnatscaffold_80186070 | Terpenoid | BAHD | low | borderline | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| Rnatscaffold_80188350 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| Rnatscaffold_80189220 | Terpenoid | BAHD | medium | pass | BAHD__00014__sp_B9RK42_GPC1_RICCO |
| Rnatscaffold_80189950 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| Rnatscaffold_80190330 | Terpenoid | BAHD | medium | pass | BAHD__00079__sp_Q9LIE4_ZDHC8_ARATH |
| Rnatscaffold_80199270 | Terpenoid | BAHD | medium | pass | BAHD__00092__sp_Q9SU91_LPXA_ARATH |
| Rnatscaffold_80202710 | Terpenoid | BAHD | medium | pass | BAHD__00052__sp_Q8GWG0_GPAT9_ARATH |
| Rnatscaffold_80202900 | Terpenoid | BAHD | medium | pass | BAHD__00022__sp_K7PEY4_RAM2_MEDTR |
| Rnatscaffold_80206120 | Terpenoid | BAHD | medium | pass | BAHD__00042__sp_Q500Z2_ZDH20_ARATH |
| Rnatscaffold_80207780 | Terpenoid | BAHD | medium | pass | BAHD__00052__sp_Q8GWG0_GPAT9_ARATH |
| Rnatscaffold_80208240 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| Rnatscaffold_80209330 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Rnatscaffold_80212820 | Terpenoid | BAHD | medium | pass | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| Rnatscaffold_80212830 | Terpenoid | BAHD | medium | pass | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| Rnatscaffold_80212860 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Rnatscaffold_80192340 | Terpenoid | CMK/IspE | high | pass | CMK_IspE__00001__sp_O81014_ISPE_ARATH |
| Rnatscaffold_10002720 | Terpenoid | CYP71 | medium | pass | CYP71__00001__sp_Q8W4D0_CPY71_ARATH |
| Rnatscaffold_10010810 | Terpenoid | CYP71 | low | borderline | CYP71__00001__sp_Q8W4D0_CPY71_ARATH |