PlantSME Plant secondary metabolism enzyme database

Ricciocarpus natans (ricciocarpus_natans)

Imported from atlas release summary for Ricciocarpus natans.

578
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 183 9 POD (119) View species results
Terpenoid pathway 129 19 BAHD (61) View species results
Alkaloid pathway 120 19 TRI/TRII (23) View species results
Flavonoid pathway 59 7 CHS (17) View species results
Rosmarinic acid pathway 54 7 C4H (23) View species results
Steroid pathway 33 13 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 521 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 123 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Rnatscaffold_10005140 Flavonoid 4CL low borderline
Rnatscaffold_10017180 Flavonoid 4CL low borderline
Rnatscaffold_160023940 Flavonoid 4CL low borderline
Rnatscaffold_160024790 Flavonoid 4CL low borderline
Rnatscaffold_20043800 Flavonoid 4CL low borderline
Rnatscaffold_20045080 Flavonoid 4CL medium pass
Rnatscaffold_270058780 Flavonoid 4CL low borderline
Rnatscaffold_30070300 Flavonoid 4CL low borderline
Rnatscaffold_320082640 Flavonoid 4CL low borderline
Rnatscaffold_320083070 Flavonoid 4CL medium pass
Rnatscaffold_40109010 Flavonoid 4CL low borderline
Rnatscaffold_50123540 Flavonoid 4CL low borderline
Rnatscaffold_50126300 Flavonoid 4CL low borderline
Rnatscaffold_520143540 Flavonoid 4CL low borderline
Rnatscaffold_60162360 Flavonoid 4CL low borderline
Rnatscaffold_70175140 Flavonoid 4CL medium pass
Rnatscaffold_70183860 Flavonoid 4CL medium pass
Rnatscaffold_80191320 Flavonoid 4CL medium pass
Rnatscaffold_80193260 Flavonoid 4CL medium pass
Rnatscaffold_80194590 Flavonoid 4CL medium pass
Rnatscaffold_80195000 Flavonoid 4CL medium pass
Rnatscaffold_80195030 Flavonoid 4CL medium pass
Rnatscaffold_80202350 Flavonoid 4CL low borderline
Rnatscaffold_80204810 Flavonoid 4CL low borderline
Rnatscaffold_80207430 Flavonoid 4CL medium pass
Rnatscaffold_10016690 Flavonoid ANR medium borderline
Rnatscaffold_30062990 Flavonoid ANR medium borderline
Rnatscaffold_30075700 Flavonoid ANR medium borderline
Rnatscaffold_30075710 Flavonoid ANR medium borderline
Rnatscaffold_40102210 Flavonoid ANR medium borderline
Rnatscaffold_60150630 Flavonoid ANR medium borderline
Rnatscaffold_60152070 Flavonoid ANR medium borderline
Rnatscaffold_60152100 Flavonoid ANR medium borderline
Rnatscaffold_60155600 Flavonoid ANR low borderline
Rnatscaffold_80196380 Flavonoid ANR medium borderline
Rnatscaffold_80204420 Flavonoid ANR low borderline
Rnatscaffold_100018460 Flavonoid ANS/LDOX low borderline
Rnatscaffold_10003250 Flavonoid ANS/LDOX medium borderline
Rnatscaffold_40093180 Flavonoid ANS/LDOX medium borderline
Rnatscaffold_80203870 Flavonoid ANS/LDOX medium borderline
Rnatscaffold_10018180 Flavonoid C4H medium borderline
Rnatscaffold_320085130 Flavonoid C4H low borderline
Rnatscaffold_50131960 Flavonoid C4H low borderline
Rnatscaffold_50132570 Flavonoid C4H medium borderline
Rnatscaffold_60153380 Flavonoid C4H medium borderline
Rnatscaffold_60153390 Flavonoid C4H medium borderline
Rnatscaffold_60163970 Flavonoid C4H low borderline
Rnatscaffold_70170110 Flavonoid C4H medium borderline
Rnatscaffold_80196140 Flavonoid C4H medium borderline
Rnatscaffold_80206440 Flavonoid C4H medium borderline