PlantSME Plant secondary metabolism enzyme database

Saccharum spp.R570 (saccharum_spp_r570)

Imported from atlas release summary for Saccharum spp.R570.

1344
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 377 16 UGT (135) View species results
Alkaloid pathway 294 23 7DLGT (67) View species results
Phenylpropanoid pathway 266 11 POD (131) View species results
Flavonoid pathway 197 12 UFGT (123) View species results
Rosmarinic acid pathway 140 7 C4H (84) View species results
Steroid pathway 70 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1494 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 195 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Sspp01G0014270.1 Rosmarinic Acid C4H medium pass
Sspp01G0014970.1 Rosmarinic Acid C4H low borderline
Sspp01G0015030.1 Rosmarinic Acid C4H low borderline
Sspp01G0015520.1 Rosmarinic Acid C4H low borderline
Sspp01G0015530.1 Rosmarinic Acid C4H low borderline
Sspp01G0015590.1 Rosmarinic Acid C4H medium pass
Sspp01G0015600.1 Rosmarinic Acid C4H medium pass
Sspp01G0018580.1 Rosmarinic Acid C4H low borderline
Sspp01G0018770.1 Rosmarinic Acid C4H medium pass
Sspp01G0024410.1 Rosmarinic Acid C4H low borderline
Sspp01G0025000.1 Rosmarinic Acid C4H low borderline
Sspp01G0025440.1 Rosmarinic Acid C4H medium pass
Sspp01G0025890.1 Rosmarinic Acid C4H medium pass
Sspp01G0026720.1 Rosmarinic Acid C4H medium pass
Sspp01G0027700.1 Rosmarinic Acid C4H low borderline
Sspp01G0027850.1 Rosmarinic Acid C4H low borderline
Sspp01G0027870.1 Rosmarinic Acid C4H low borderline
Sspp01G0027890.1 Rosmarinic Acid C4H low borderline
Sspp01G0028160.1 Rosmarinic Acid C4H low borderline
Sspp01G0028300.1 Rosmarinic Acid C4H medium pass
Sspp01G0028310.1 Rosmarinic Acid C4H low borderline
Sspp01G0028340.1 Rosmarinic Acid C4H medium pass
Sspp01G0028350.1 Rosmarinic Acid C4H medium pass
Sspp01G0028420.1 Rosmarinic Acid C4H low borderline
Sspp01G0028430.1 Rosmarinic Acid C4H medium pass
Sspp01G0028480.1 Rosmarinic Acid C4H low borderline
Sspp01G0028720.1 Rosmarinic Acid C4H medium pass
Sspp01G0030110.1 Rosmarinic Acid C4H low borderline
Sspp01G0030330.1 Rosmarinic Acid C4H low borderline
Sspp01G0035260.1 Rosmarinic Acid C4H medium pass
Sspp01G0035270.1 Rosmarinic Acid C4H low borderline
Sspp01G0040340.1 Rosmarinic Acid C4H low borderline
Sspp01G0042650.1 Rosmarinic Acid C4H low borderline
Sspp02G0000030.1 Rosmarinic Acid C4H low borderline
Sspp02G0001890.1 Rosmarinic Acid C4H low borderline
Sspp02G0002720.1 Rosmarinic Acid C4H medium pass
Sspp02G0002730.1 Rosmarinic Acid C4H medium pass
Sspp02G0003120.1 Rosmarinic Acid C4H medium pass
Sspp02G0005830.1 Rosmarinic Acid C4H low borderline
Sspp02G0005840.1 Rosmarinic Acid C4H medium pass
Sspp02G0005880.1 Rosmarinic Acid C4H medium pass
Sspp02G0006060.1 Rosmarinic Acid C4H medium pass
Sspp02G0007020.1 Rosmarinic Acid C4H low borderline
Sspp02G0007030.1 Rosmarinic Acid C4H low borderline
Sspp02G0008510.1 Rosmarinic Acid C4H medium pass
Sspp02G0008530.1 Rosmarinic Acid C4H medium pass
Sspp02G0009920.1 Rosmarinic Acid C4H low borderline
Sspp02G0011860.1 Rosmarinic Acid C4H low borderline
Sspp02G0012390.1 Rosmarinic Acid C4H low borderline
Sspp02G0013930.1 Rosmarinic Acid C4H medium pass