PlantSME Plant secondary metabolism enzyme database

Saccharum spp.R570 (saccharum_spp_r570)

Imported from atlas release summary for Saccharum spp.R570.

1344
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 377 16 UGT (135) View species results
Alkaloid pathway 294 23 7DLGT (67) View species results
Phenylpropanoid pathway 266 11 POD (131) View species results
Flavonoid pathway 197 12 UFGT (123) View species results
Rosmarinic acid pathway 140 7 C4H (84) View species results
Steroid pathway 70 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1494 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 195 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Sspp02G0013960.1 Rosmarinic Acid C4H low borderline
Sspp02G0013970.1 Rosmarinic Acid C4H medium pass
Sspp02G0013980.1 Rosmarinic Acid C4H medium pass
Sspp02G0014110.1 Rosmarinic Acid C4H medium pass
Sspp02G0014120.1 Rosmarinic Acid C4H low borderline
Sspp02G0018670.1 Rosmarinic Acid C4H low borderline
Sspp02G0018780.1 Rosmarinic Acid C4H medium pass
Sspp02G0025290.1 Rosmarinic Acid C4H low borderline
Sspp02G0027020.1 Rosmarinic Acid C4H medium pass
Sspp02G0029570.1 Rosmarinic Acid C4H low borderline
Sspp02G0030250.1 Rosmarinic Acid C4H low borderline
Sspp02G0030320.1 Rosmarinic Acid C4H medium pass
Sspp02G0030340.1 Rosmarinic Acid C4H low borderline
Sspp02G0030350.1 Rosmarinic Acid C4H medium pass
Sspp02G0030420.1 Rosmarinic Acid C4H medium pass
Sspp02G0030470.1 Rosmarinic Acid C4H low borderline
Sspp02G0031090.1 Rosmarinic Acid C4H low borderline
Sspp03G0000660.1 Rosmarinic Acid C4H medium pass
Sspp03G0000670.1 Rosmarinic Acid C4H low borderline
Sspp03G0000680.1 Rosmarinic Acid C4H medium pass
Sspp03G0002200.1 Rosmarinic Acid C4H low borderline
Sspp03G0007290.1 Rosmarinic Acid C4H low borderline
Sspp03G0015580.1 Rosmarinic Acid C4H low borderline
Sspp03G0015590.1 Rosmarinic Acid C4H low borderline
Sspp03G0015620.1 Rosmarinic Acid C4H low borderline
Sspp03G0015640.1 Rosmarinic Acid C4H low borderline
Sspp03G0015660.1 Rosmarinic Acid C4H low borderline
Sspp03G0015680.1 Rosmarinic Acid C4H low borderline
Sspp03G0015700.1 Rosmarinic Acid C4H low borderline
Sspp03G0015710.1 Rosmarinic Acid C4H low borderline
Sspp03G0015730.1 Rosmarinic Acid C4H low borderline
Sspp03G0015760.1 Rosmarinic Acid C4H low borderline
Sspp03G0015790.1 Rosmarinic Acid C4H low borderline
Sspp03G0018640.1 Rosmarinic Acid C4H low borderline
Sspp03G0018670.1 Rosmarinic Acid C4H low borderline
Sspp03G0024800.1 Rosmarinic Acid C4H medium pass
Sspp03G0024810.1 Rosmarinic Acid C4H medium pass
Sspp03G0031250.1 Rosmarinic Acid C4H low borderline
Sspp04G0004960.1 Rosmarinic Acid C4H medium pass
Sspp04G0004970.1 Rosmarinic Acid C4H low borderline
Sspp04G0004980.1 Rosmarinic Acid C4H low borderline
Sspp04G0004990.1 Rosmarinic Acid C4H medium pass
Sspp04G0005000.1 Rosmarinic Acid C4H medium pass
Sspp04G0005010.1 Rosmarinic Acid C4H low borderline
Sspp04G0005020.1 Rosmarinic Acid C4H low borderline
Sspp04G0005030.1 Rosmarinic Acid C4H low borderline
Sspp04G0006760.1 Rosmarinic Acid C4H low borderline
Sspp04G0007380.1 Rosmarinic Acid C4H low borderline
Sspp04G0010750.1 Rosmarinic Acid C4H medium pass
Sspp04G0013240.1 Rosmarinic Acid C4H low borderline