PlantSME Plant secondary metabolism enzyme database

Saccharum spp.R570 (saccharum_spp_r570)

Imported from atlas release summary for Saccharum spp.R570.

1344
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 377 16 UGT (135) View species results
Alkaloid pathway 294 23 7DLGT (67) View species results
Phenylpropanoid pathway 266 11 POD (131) View species results
Flavonoid pathway 197 12 UFGT (123) View species results
Rosmarinic acid pathway 140 7 C4H (84) View species results
Steroid pathway 70 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1494 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 195 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Sspp04G0013560.1 Rosmarinic Acid C4H low borderline
Sspp04G0018840.1 Rosmarinic Acid C4H low borderline
Sspp05G0005030.1 Rosmarinic Acid C4H medium pass
Sspp05G0006410.1 Rosmarinic Acid C4H low borderline
Sspp05G0006930.1 Rosmarinic Acid C4H medium pass
Sspp05G0007690.1 Rosmarinic Acid C4H medium pass
Sspp05G0008020.1 Rosmarinic Acid C4H low borderline
Sspp05G0008030.1 Rosmarinic Acid C4H low borderline
Sspp05G0008340.1 Rosmarinic Acid C4H medium pass
Sspp05G0008350.1 Rosmarinic Acid C4H low borderline
Sspp05G0010880.1 Rosmarinic Acid C4H low borderline
Sspp05G0010890.1 Rosmarinic Acid C4H medium pass
Sspp05G0010910.1 Rosmarinic Acid C4H medium pass
Sspp05G0010950.1 Rosmarinic Acid C4H low borderline
Sspp05G0011390.1 Rosmarinic Acid C4H low borderline
Sspp05G0011400.1 Rosmarinic Acid C4H medium pass
Sspp06G0000100.1 Rosmarinic Acid C4H low borderline
Sspp06G0002130.1 Rosmarinic Acid C4H medium pass
Sspp06G0002200.1 Rosmarinic Acid C4H medium pass
Sspp06G0002210.1 Rosmarinic Acid C4H medium pass
Sspp06G0002600.1 Rosmarinic Acid C4H medium pass
Sspp06G0002620.1 Rosmarinic Acid C4H medium pass
Sspp06G0003430.1 Rosmarinic Acid C4H medium pass
Sspp06G0007040.1 Rosmarinic Acid C4H low borderline
Sspp06G0007840.1 Rosmarinic Acid C4H low borderline
Sspp06G0019080.1 Rosmarinic Acid C4H medium pass
Sspp07G0000310.1 Rosmarinic Acid C4H medium pass
Sspp07G0000320.1 Rosmarinic Acid C4H medium pass
Sspp07G0001160.1 Rosmarinic Acid C4H low borderline
Sspp07G0002170.1 Rosmarinic Acid C4H medium pass
Sspp07G0003190.1 Rosmarinic Acid C4H low borderline
Sspp07G0003940.1 Rosmarinic Acid C4H low borderline
Sspp07G0003950.1 Rosmarinic Acid C4H low borderline
Sspp07G0008860.1 Rosmarinic Acid C4H low borderline
Sspp07G0009180.1 Rosmarinic Acid C4H low borderline
Sspp07G0009700.1 Rosmarinic Acid C4H low borderline
Sspp07G0009740.1 Rosmarinic Acid C4H low borderline
Sspp07G0011020.1 Rosmarinic Acid C4H medium pass
Sspp07G0011030.1 Rosmarinic Acid C4H medium pass
Sspp07G0011270.1 Rosmarinic Acid C4H low borderline
Sspp07G0011280.1 Rosmarinic Acid C4H low borderline
Sspp07G0011290.1 Rosmarinic Acid C4H medium pass
Sspp07G0011340.1 Rosmarinic Acid C4H low borderline
Sspp07G0011660.1 Rosmarinic Acid C4H low borderline
Sspp07G0013990.1 Rosmarinic Acid C4H medium pass
Sspp07G0014020.1 Rosmarinic Acid C4H medium pass
Sspp07G0014210.1 Rosmarinic Acid C4H low borderline
Sspp07G0014220.1 Rosmarinic Acid C4H low borderline
Sspp08G0000670.1 Rosmarinic Acid C4H low borderline
Sspp08G0000820.1 Rosmarinic Acid C4H low borderline