PlantSME Plant secondary metabolism enzyme database

Saccharum spp.R570 (saccharum_spp_r570)

Imported from atlas release summary for Saccharum spp.R570.

1512
Candidate Protein Records
1344
Pathway-Level Records
3358
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 377 16 UGT (135) View species results
Alkaloid pathway 294 23 7DLGT (67) View species results
Phenylpropanoid pathway 266 11 POD (131) View species results
Flavonoid pathway 197 12 UFGT (123) View species results
Rosmarinic acid pathway 140 7 C4H (84) View species results
Steroid pathway 70 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1494 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 195 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Sspp03G0002910.1 Alkaloid CODM/T6ODM medium borderline
Sspp03G0003450.1 Alkaloid CODM/T6ODM medium borderline
Sspp03G0011740.1 Alkaloid CODM/T6ODM medium borderline
Sspp03G0012070.1 Alkaloid CODM/T6ODM medium borderline
Sspp03G0013110.1 Alkaloid CODM/T6ODM medium borderline
Sspp04G0000090.1 Alkaloid CODM/T6ODM medium borderline
Sspp04G0015550.1 Alkaloid CODM/T6ODM medium borderline
Sspp04G0023300.1 Alkaloid CODM/T6ODM medium borderline
Sspp06G0009790.1 Alkaloid CODM/T6ODM medium borderline
Sspp06G0013580.1 Alkaloid CODM/T6ODM medium borderline
Sspp06G0014260.1 Alkaloid CODM/T6ODM medium borderline
Sspp07G0012670.1 Alkaloid CODM/T6ODM medium borderline
Sspp08G0007080.1 Alkaloid CODM/T6ODM medium borderline
Sspp08G0007090.1 Alkaloid CODM/T6ODM medium borderline
Sspp08G0007110.1 Alkaloid CODM/T6ODM medium borderline
Sspp08G0007230.1 Alkaloid CODM/T6ODM medium borderline
Sspp09G0004700.1 Alkaloid CODM/T6ODM medium borderline
Sspp09G0006390.1 Alkaloid CODM/T6ODM medium borderline
Sspp10G0001660.1 Alkaloid CODM/T6ODM medium borderline
Sspp10G0004740.1 Alkaloid CODM/T6ODM medium borderline
Sspp10G0005500.1 Alkaloid CODM/T6ODM medium borderline
Sspp10G0005510.1 Alkaloid CODM/T6ODM medium borderline
Sspp10G0005520.1 Alkaloid CODM/T6ODM medium borderline
Sspp10G0012140.1 Alkaloid CODM/T6ODM medium borderline
Sspp01G0020870.1 Alkaloid COR medium pass
Sspp01G0020880.1 Alkaloid COR medium pass
Sspp01G0035950.1 Alkaloid COR medium pass
Sspp02G0015190.1 Alkaloid COR medium pass
Sspp03G0026190.1 Alkaloid COR medium pass
Sspp03G0026200.1 Alkaloid COR medium pass
Sspp03G0026210.1 Alkaloid COR medium pass
Sspp06G0005460.1 Alkaloid COR low borderline
Sspp06G0005470.1 Alkaloid COR medium pass
Sspp06G0005480.1 Alkaloid COR medium pass
Sspp06G0005490.1 Alkaloid COR medium pass
Sspp06G0011860.1 Alkaloid COR medium pass
Sspp09G0013800.1 Alkaloid COR medium pass
Sspp01G0020410.1 Alkaloid CYP719 medium borderline
Sspp03G0019080.1 Alkaloid CYP719 low borderline
Sspp04G0007380.1 Alkaloid CYP719 medium borderline
Sspp04G0013240.1 Alkaloid CYP719 medium borderline
Sspp06G0007040.1 Alkaloid CYP719 medium borderline
Sspp06G0019070.1 Alkaloid CYP719 medium borderline
Sspp07G0001160.1 Alkaloid CYP719 medium borderline
Sspp08G0000670.1 Alkaloid CYP719 medium borderline
Sspp01G0005800.1 Alkaloid CYP80B1 medium borderline
Sspp01G0014970.1 Alkaloid CYP80B1 medium borderline
Sspp01G0028420.1 Alkaloid CYP80B1 medium borderline
Sspp03G0015930.1 Alkaloid CYP80B1 medium borderline
Sspp07G0011040.1 Alkaloid CYP80B1 medium borderline