PlantSME Plant secondary metabolism enzyme database

Salvia miltiorrhiza (salvia_miltiorrhiza)

Imported from atlas release summary for Salvia miltiorrhiza.

1924
Candidate Protein Records
1674
Pathway-Level Records
4437
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 542 19 BAHD (187) View species results
Alkaloid pathway 330 20 7DLGT (84) View species results
Phenylpropanoid pathway 299 11 POD (118) View species results
Flavonoid pathway 245 11 UFGT (179) View species results
Rosmarinic acid pathway 177 7 C4H (91) View species results
Steroid pathway 81 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1940 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 325 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
Smil05G0002550.1 Alkaloid T3O medium borderline
Smil05G0002560.1 Alkaloid T3O medium borderline
Smil05G0002570.1 Alkaloid T3O medium borderline
Smil05G0010490.1 Alkaloid T3O low borderline
Smil05G0010500.1 Alkaloid T3O medium pass
Smil05G0011680.1 Alkaloid T3O medium borderline
Smil05G0011960.1 Alkaloid T3O medium borderline
Smil05G0011970.1 Alkaloid T3O medium borderline
Smil05G0015120.1 Alkaloid T3O low borderline
Smil05G0016780.1 Alkaloid T3O medium borderline
Smil05G0016980.1 Alkaloid T3O medium pass
Smil05G0024440.1 Alkaloid T3O medium pass
Smil05G0025460.1 Alkaloid T3O low borderline
Smil05G0027760.1 Alkaloid T3O medium pass
Smil05G0027770.1 Alkaloid T3O medium pass
Smil05G0028660.1 Alkaloid T3O medium borderline
Smil05G0028670.1 Alkaloid T3O medium borderline
Smil05G0028680.1 Alkaloid T3O medium borderline
Smil05G0028740.1 Alkaloid T3O medium borderline
Smil05G0032570.1 Alkaloid T3O low borderline
Smil06G0004880.1 Alkaloid T3O medium borderline
Smil06G0004910.1 Alkaloid T3O medium borderline
Smil06G0008740.1 Alkaloid T3O medium borderline
Smil06G0008750.1 Alkaloid T3O medium borderline
Smil06G0012440.1 Alkaloid T3O medium borderline
Smil06G0012500.1 Alkaloid T3O medium borderline
Smil06G0012510.1 Alkaloid T3O medium borderline
Smil06G0012520.1 Alkaloid T3O medium borderline
Smil06G0012530.1 Alkaloid T3O medium borderline
Smil06G0014700.1 Alkaloid T3O low borderline
Smil06G0014870.1 Alkaloid T3O medium pass
Smil06G0015150.1 Alkaloid T3O medium borderline
Smil06G0017650.1 Alkaloid T3O medium borderline
Smil06G0018170.1 Alkaloid T3O medium borderline
Smil06G0018190.1 Alkaloid T3O medium borderline
Smil06G0024190.1 Alkaloid T3O medium borderline
Smil06G0026150.1 Alkaloid T3O low borderline
Smil06G0026910.1 Alkaloid T3O medium borderline
Smil06G0027490.1 Alkaloid T3O medium borderline
Smil06G0027510.1 Alkaloid T3O medium borderline
Smil07G0001050.1 Alkaloid T3O medium borderline
Smil07G0002180.1 Alkaloid T3O medium borderline
Smil07G0002640.1 Alkaloid T3O low borderline
Smil07G0011840.1 Alkaloid T3O medium borderline
Smil07G0014180.1 Alkaloid T3O medium borderline
Smil07G0014230.1 Alkaloid T3O medium borderline
Smil07G0016000.1 Alkaloid T3O medium pass
Smil07G0019770.1 Alkaloid T3O medium pass
Smil07G0021140.1 Alkaloid T3O medium pass
Smil07G0021400.1 Alkaloid T3O medium borderline