PlantSME Plant secondary metabolism enzyme database

Salvia miltiorrhiza (salvia_miltiorrhiza)

Imported from atlas release summary for Salvia miltiorrhiza.

1924
Candidate Protein Records
1674
Pathway-Level Records
4437
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 542 19 BAHD (187) View species results
Alkaloid pathway 330 20 7DLGT (84) View species results
Phenylpropanoid pathway 299 11 POD (118) View species results
Flavonoid pathway 245 11 UFGT (179) View species results
Rosmarinic acid pathway 177 7 C4H (91) View species results
Steroid pathway 81 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1940 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 325 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Smil05G0021950.1 Alkaloid BBE medium borderline
Smil05G0021970.1 Alkaloid BBE medium borderline
Smil05G0021980.1 Alkaloid BBE medium borderline
Smil05G0021990.1 Alkaloid BBE medium borderline
Smil05G0022010.1 Alkaloid BBE medium borderline
Smil05G0022030.1 Alkaloid BBE medium borderline
Smil05G0022340.1 Alkaloid BBE medium borderline
Smil05G0026880.1 Alkaloid BBE medium borderline
Smil06G0019690.1 Alkaloid BBE medium borderline
Smil06G0031160.1 Alkaloid BBE medium borderline
Smil07G0006590.1 Alkaloid BBE medium borderline
Smil07G0010090.1 Alkaloid BBE low borderline
SmilGWHAOSJ000003430003760.1 Alkaloid BBE medium borderline
Smil01G0001100.1 Alkaloid CNMT medium borderline
Smil01G0010400.1 Alkaloid CNMT medium borderline
Smil01G0020310.1 Alkaloid CNMT low borderline
Smil03G0014610.1 Alkaloid CNMT low borderline
Smil03G0035310.1 Alkaloid CNMT low borderline
Smil04G0019570.1 Alkaloid CNMT low borderline
Smil05G0010080.1 Alkaloid CNMT low borderline
Smil05G0018990.1 Alkaloid CNMT medium pass
Smil05G0019000.1 Alkaloid CNMT medium pass
Smil05G0019010.1 Alkaloid CNMT medium pass
Smil05G0021270.1 Alkaloid CNMT medium borderline
Smil07G0003630.1 Alkaloid CNMT low borderline
Smil00G0007910.1 Alkaloid CODM/T6ODM medium borderline
Smil00G0013700.1 Alkaloid CODM/T6ODM medium borderline
Smil00G0013720.1 Alkaloid CODM/T6ODM medium borderline
Smil00G0015150.1 Alkaloid CODM/T6ODM medium borderline
Smil00G0019020.1 Alkaloid CODM/T6ODM medium borderline
Smil00G0035070.1 Alkaloid CODM/T6ODM medium borderline
Smil00G0040150.1 Alkaloid CODM/T6ODM medium borderline
Smil00G0040160.1 Alkaloid CODM/T6ODM medium borderline
Smil00G0042750.1 Alkaloid CODM/T6ODM medium borderline
Smil01G0003070.1 Alkaloid CODM/T6ODM medium borderline
Smil01G0006680.1 Alkaloid CODM/T6ODM medium borderline
Smil01G0010350.1 Alkaloid CODM/T6ODM medium borderline
Smil01G0012980.1 Alkaloid CODM/T6ODM medium borderline
Smil01G0013060.1 Alkaloid CODM/T6ODM medium borderline
Smil01G0013080.1 Alkaloid CODM/T6ODM medium borderline
Smil01G0013100.1 Alkaloid CODM/T6ODM medium borderline
Smil01G0013110.1 Alkaloid CODM/T6ODM medium borderline
Smil01G0013130.1 Alkaloid CODM/T6ODM medium borderline
Smil01G0013160.1 Alkaloid CODM/T6ODM medium borderline
Smil02G0005390.1 Alkaloid CODM/T6ODM medium borderline
Smil02G0012970.1 Alkaloid CODM/T6ODM medium borderline
Smil02G0033990.1 Alkaloid CODM/T6ODM medium borderline
Smil03G0010690.1 Alkaloid CODM/T6ODM medium borderline
Smil03G0014020.1 Alkaloid CODM/T6ODM medium borderline
Smil03G0014310.1 Alkaloid CODM/T6ODM medium borderline