PlantSME Plant secondary metabolism enzyme database

Salvia miltiorrhiza (salvia_miltiorrhiza)

Imported from atlas release summary for Salvia miltiorrhiza.

1924
Candidate Protein Records
1674
Pathway-Level Records
4437
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 542 19 BAHD (187) View species results
Alkaloid pathway 330 20 7DLGT (84) View species results
Phenylpropanoid pathway 299 11 POD (118) View species results
Flavonoid pathway 245 11 UFGT (179) View species results
Rosmarinic acid pathway 177 7 C4H (91) View species results
Steroid pathway 81 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1940 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 325 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Smil03G0017890.1 Alkaloid CYP719 medium borderline
Smil03G0017900.1 Alkaloid CYP719 medium borderline
Smil03G0020150.1 Alkaloid CYP719 medium borderline
Smil04G0006570.1 Alkaloid CYP719 medium borderline
Smil04G0030330.1 Alkaloid CYP719 medium borderline
Smil05G0013610.1 Alkaloid CYP719 low borderline
Smil07G0013640.1 Alkaloid CYP719 medium borderline
Smil00G0023080.1 Alkaloid CYP80B1 medium borderline
Smil01G0016640.1 Alkaloid CYP80B1 medium borderline
Smil01G0029460.1 Alkaloid CYP80B1 medium borderline
Smil01G0029570.1 Alkaloid CYP80B1 medium borderline
Smil02G0034330.1 Alkaloid CYP80B1 medium borderline
Smil02G0034520.1 Alkaloid CYP80B1 medium borderline
Smil03G0003460.1 Alkaloid CYP80B1 medium borderline
Smil03G0011880.1 Alkaloid CYP80B1 medium borderline
Smil03G0011890.1 Alkaloid CYP80B1 medium borderline
Smil03G0017950.1 Alkaloid CYP80B1 medium borderline
Smil03G0036380.1 Alkaloid CYP80B1 medium borderline
Smil03G0036420.1 Alkaloid CYP80B1 medium borderline
Smil04G0002780.1 Alkaloid CYP80F1 medium borderline
Smil06G0002060.1 Alkaloid CYP80F1 medium borderline
SmilGWHAOSJ000003060002940.1 Alkaloid CYP80F1 medium borderline
Smil00G0016620.1 Alkaloid G8O/G8H medium borderline
Smil02G0004310.1 Alkaloid G8O/G8H medium borderline
Smil03G0019000.1 Alkaloid G8O/G8H medium borderline
Smil03G0019020.1 Alkaloid G8O/G8H medium borderline
Smil03G0022800.1 Alkaloid G8O/G8H medium borderline
Smil04G0016040.1 Alkaloid G8O/G8H medium borderline
Smil04G0025760.1 Alkaloid G8O/G8H low borderline
Smil04G0029750.1 Alkaloid G8O/G8H medium borderline
Smil05G0001440.1 Alkaloid G8O/G8H medium borderline
Smil05G0001450.1 Alkaloid G8O/G8H medium borderline
Smil05G0001490.1 Alkaloid G8O/G8H medium borderline
Smil05G0001500.1 Alkaloid G8O/G8H low borderline
Smil05G0001510.1 Alkaloid G8O/G8H medium borderline
Smil05G0015260.1 Alkaloid G8O/G8H medium borderline
Smil05G0016100.1 Alkaloid G8O/G8H medium borderline
Smil06G0012480.1 Alkaloid G8O/G8H low borderline
Smil06G0014680.1 Alkaloid G8O/G8H medium borderline
Smil00G0006080.1 Alkaloid GES medium pass
Smil00G0016270.1 Alkaloid GES low borderline
Smil00G0016300.1 Alkaloid GES low borderline
Smil00G0029680.1 Alkaloid GES low borderline
Smil00G0037580.1 Alkaloid GES medium pass
Smil00G0037600.1 Alkaloid GES medium pass
Smil00G0037780.1 Alkaloid GES medium pass
Smil00G0037790.1 Alkaloid GES medium pass
Smil00G0043450.1 Alkaloid GES medium pass
Smil01G0003400.1 Alkaloid GES medium pass
Smil01G0003850.1 Alkaloid GES medium pass