PlantSME Plant secondary metabolism enzyme database

Schistidium cupulare (schistidium_cupulare)

Imported from atlas release summary for Schistidium cupulare.

552
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 151 11 POD (77) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 109 18 NMT (21) View species results
Flavonoid pathway 59 8 UFGT (18) View species results
Rosmarinic acid pathway 56 7 C4H (19) View species results
Steroid pathway 36 12 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 605 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 112 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Scup1630630017310 Rosmarinic Acid 4CL low borderline
Scup1667670021540 Rosmarinic Acid 4CL medium pass
Scup1740300031890 Rosmarinic Acid 4CL low borderline
Scup1765440040270 Rosmarinic Acid 4CL medium pass
Scup1766080041120 Rosmarinic Acid 4CL low borderline
Scup1766080041130 Rosmarinic Acid 4CL medium pass
Scup1817400077600 Rosmarinic Acid 4CL low borderline
Scup1821000082490 Rosmarinic Acid 4CL medium pass
Scup1825020087740 Rosmarinic Acid 4CL medium pass
Scup1828270092870 Rosmarinic Acid 4CL medium pass
Scup1835640105830 Rosmarinic Acid 4CL low borderline
Scup1836090107100 Rosmarinic Acid 4CL low borderline
Scup1841850118020 Rosmarinic Acid 4CL low borderline
Scup1844690125030 Rosmarinic Acid 4CL low borderline
Scup1846360128400 Rosmarinic Acid 4CL medium pass
Scup1851880143090 Rosmarinic Acid 4CL medium pass
Scup1863920180610 Rosmarinic Acid 4CL medium pass
Scup1866410190210 Rosmarinic Acid 4CL medium pass
Scup1868780201440 Rosmarinic Acid 4CL low borderline
Scup1870320208440 Rosmarinic Acid 4CL low borderline
Scup1870470209250 Rosmarinic Acid 4CL medium pass
Scup1871080212170 Rosmarinic Acid 4CL low borderline
Scup1872180216790 Rosmarinic Acid 4CL low borderline
Scup1872830219910 Rosmarinic Acid 4CL medium pass
Scup117170002410 Rosmarinic Acid C4H medium pass
Scup1195390004110 Rosmarinic Acid C4H low borderline
Scup1347580006350 Rosmarinic Acid C4H low borderline
Scup1347580006360 Rosmarinic Acid C4H low borderline
Scup1371880008080 Rosmarinic Acid C4H medium pass
Scup1511640010040 Rosmarinic Acid C4H low borderline
Scup1536500010790 Rosmarinic Acid C4H low borderline
Scup1637070018800 Rosmarinic Acid C4H low borderline
Scup1712880026200 Rosmarinic Acid C4H low borderline
Scup1715250027280 Rosmarinic Acid C4H low borderline
Scup1717100028290 Rosmarinic Acid C4H low borderline
Scup1740550031990 Rosmarinic Acid C4H low borderline
Scup1747650034890 Rosmarinic Acid C4H low borderline
Scup1752750036480 Rosmarinic Acid C4H medium pass
Scup1753710037250 Rosmarinic Acid C4H low borderline
Scup1753770037260 Rosmarinic Acid C4H medium pass
Scup1760540038450 Rosmarinic Acid C4H low borderline
Scup1767250042340 Rosmarinic Acid C4H low borderline
Scup1767690042690 Rosmarinic Acid C4H low borderline
Scup1790110054170 Rosmarinic Acid C4H low borderline
Scup1790120054220 Rosmarinic Acid C4H medium pass
Scup1792970057020 Rosmarinic Acid C4H low borderline
Scup1796140060470 Rosmarinic Acid C4H low borderline
Scup1808500069020 Rosmarinic Acid C4H low borderline
Scup1808770069670 Rosmarinic Acid C4H low borderline
Scup1810540071830 Rosmarinic Acid C4H low borderline