PlantSME Plant secondary metabolism enzyme database

Schistidium cupulare (schistidium_cupulare)

Imported from atlas release summary for Schistidium cupulare.

552
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 151 11 POD (77) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 109 18 NMT (21) View species results
Flavonoid pathway 59 8 UFGT (18) View species results
Rosmarinic acid pathway 56 7 C4H (19) View species results
Steroid pathway 36 12 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 605 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 112 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Scup1811420072740 Rosmarinic Acid C4H low borderline
Scup1812000073420 Rosmarinic Acid C4H low borderline
Scup1815900075690 Rosmarinic Acid C4H low borderline
Scup1816890077060 Rosmarinic Acid C4H low borderline
Scup1817180077370 Rosmarinic Acid C4H low borderline
Scup1817650078110 Rosmarinic Acid C4H medium pass
Scup1827380090890 Rosmarinic Acid C4H low borderline
Scup1828280092910 Rosmarinic Acid C4H low borderline
Scup1828310092970 Rosmarinic Acid C4H low borderline
Scup1829520095050 Rosmarinic Acid C4H low borderline
Scup1831340098670 Rosmarinic Acid C4H low borderline
Scup1831370098720 Rosmarinic Acid C4H low borderline
Scup1833440101900 Rosmarinic Acid C4H low borderline
Scup1834830103840 Rosmarinic Acid C4H medium pass
Scup1837010108520 Rosmarinic Acid C4H low borderline
Scup1838330110900 Rosmarinic Acid C4H medium pass
Scup1839030113030 Rosmarinic Acid C4H medium pass
Scup1840300114860 Rosmarinic Acid C4H medium pass
Scup1840300114870 Rosmarinic Acid C4H low borderline
Scup1840600115150 Rosmarinic Acid C4H low borderline
Scup1841950118230 Rosmarinic Acid C4H medium pass
Scup1844070123030 Rosmarinic Acid C4H low borderline
Scup1844690124940 Rosmarinic Acid C4H low borderline
Scup1844920125370 Rosmarinic Acid C4H low borderline
Scup1847010129690 Rosmarinic Acid C4H low borderline
Scup1848450133850 Rosmarinic Acid C4H low borderline
Scup1850070138110 Rosmarinic Acid C4H medium pass
Scup1850070138120 Rosmarinic Acid C4H low borderline
Scup1850810139900 Rosmarinic Acid C4H low borderline
Scup1851650142440 Rosmarinic Acid C4H low borderline
Scup1853710147730 Rosmarinic Acid C4H low borderline
Scup1853710147740 Rosmarinic Acid C4H low borderline
Scup1854030148460 Rosmarinic Acid C4H medium pass
Scup1854030148470 Rosmarinic Acid C4H medium pass
Scup1856060155840 Rosmarinic Acid C4H medium pass
Scup1856840158170 Rosmarinic Acid C4H low borderline
Scup1856990158500 Rosmarinic Acid C4H low borderline
Scup1857260159430 Rosmarinic Acid C4H low borderline
Scup1858490162960 Rosmarinic Acid C4H low borderline
Scup1860230168770 Rosmarinic Acid C4H low borderline
Scup1861180171540 Rosmarinic Acid C4H low borderline
Scup1861530172400 Rosmarinic Acid C4H low borderline
Scup1861530172410 Rosmarinic Acid C4H medium pass
Scup1863180177570 Rosmarinic Acid C4H low borderline
Scup1863180177580 Rosmarinic Acid C4H low borderline
Scup1863450178560 Rosmarinic Acid C4H low borderline
Scup1865810187780 Rosmarinic Acid C4H low borderline
Scup1865910188010 Rosmarinic Acid C4H low borderline
Scup1866630191410 Rosmarinic Acid C4H medium pass
Scup1867380195050 Rosmarinic Acid C4H low borderline